Gene EcHS_A4417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A4417 
SymbolhflC 
ID5593490 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp4428036 
End bp4429040 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content53% 
IMG OID640923515 
ProductFtsH protease regulator HflC 
Protein accessionYP_001460956 
Protein GI157163638 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0330] Membrane protease subunits, stomatin/prohibitin homologs 
TIGRFAM ID[TIGR01932] HflC protein 


Plasmid Coverage information

Num covering plasmid clones49 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTAAGT CAGTTATCGC GATTATCATC ATCGTGCTGG TAGTGCTTTA CATGTCTGTC 
TTTGTCGTCA AAGAAGGTGA GCGCGGTATT ACGCTGCGTT TTGGTAAGGT ACTGCGTGAC
GATGACAACA AACCTCTGGT TTATGAGCCG GGTCTGCATT TCAAGATACC GTTCATTGAA
ACGGTGAAAA TGCTCGACGC ACGTATTCAG ACCATGGACA ACCAGGCCGA CCGCTTTGTG
ACCAAAGAGA AGAAAGACCT GATCGTCGAC TCTTACATCA AATGGCGCAT CAGCGATTTC
AGCCGTTACT ACCTGGCAAC GGGTGGTGGC GACATTTCGC AAGCGGAAGT GCTGTTGAAA
CGTAAGTTCT CTGACCGTCT GCGTTCTGAA ATTGGTCGCC TGGACGTGAA AGACATCGTC
ACCGATTCCC GTGGTCGTCT GACCCTCGAA GTACGTGACG CGCTGAACTC CGGTTCTGCG
GGTACAGAAG ATGAAGTTAC TACCCCGGCA GCAGATAACG CCATTGCCGA AGCGGCAGAG
CGCGTAACGG CTGAGACGAA GGGCAAAGTT CCGGTCATCA ACCCGAACAG TATGGCGGCG
CTGGGTATTG AAGTTGTCGA TGTGCGTATC AAGCAGATCA ACCTGCCGAC CGAAGTGTCT
GAAGCGATCT ACAACCGTAT GCGCGCCGAG CGTGAAGCGG TAGCGCGTCG TCACCGTTCA
CAAGGTCAGG AAGAAGCGGA AAAACTGCGC GCGACTGCCG ACTATGAAGT GACCAGAACG
CTGGCAGAAG CTGAGCGTCA GGGCCGCATC ATGCGTGGTG AAGGCGATGC CGAAGCAGCC
AAACTGTTTG CTGATGCATT CAGTAAAGAT CCGGACTTCT ACGCATTCAT CCGTAGCCTG
CGTGCTTATG AGAACAGCTT CTCTGGCAAT CAGGACGTGA TGGTCATGAG CCCGGATAGC
GATTTCTTCC GCTACATGAA GACGCCGACT TCCGCAACGC GTTAA
 
Protein sequence
MRKSVIAIII IVLVVLYMSV FVVKEGERGI TLRFGKVLRD DDNKPLVYEP GLHFKIPFIE 
TVKMLDARIQ TMDNQADRFV TKEKKDLIVD SYIKWRISDF SRYYLATGGG DISQAEVLLK
RKFSDRLRSE IGRLDVKDIV TDSRGRLTLE VRDALNSGSA GTEDEVTTPA ADNAIAEAAE
RVTAETKGKV PVINPNSMAA LGIEVVDVRI KQINLPTEVS EAIYNRMRAE REAVARRHRS
QGQEEAEKLR ATADYEVTRT LAEAERQGRI MRGEGDAEAA KLFADAFSKD PDFYAFIRSL
RAYENSFSGN QDVMVMSPDS DFFRYMKTPT SATR