Gene EcHS_A4399 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A4399 
SymbolgenX 
ID5594679 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp4407939 
End bp4408916 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content53% 
IMG OID640923497 
Productlysyl-tRNA synthetase 
Protein accessionYP_001460941 
Protein GI157163623 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2269] Truncated, possibly inactive, lysyl-tRNA synthetase (class II) 
TIGRFAM ID[TIGR00462] lysyl-tRNA synthetase-like protein GenX 


Plasmid Coverage information

Num covering plasmid clones60 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGAAA CGGCATCCTG GCAGCCGAGC GCATCCATTC CTAACTTATT AAAACGCGCG 
GCGATTATGG CGGAGATCCG TCGTTTCTTT GCCGATCGTG GAGTGCTGGA GGTGGAGACG
CCTTGTATGA GCCAGGCGAC GGTAACCGAT ATTCATTTGG TCCCGTTTGA GACACGTTTC
GTTGGCCCCG GGCATTCGCA GGGGATGAAT CTCTGGTTAA TGACCAGCCC GGAATACCAT
ATGAAACGCC TGCTGGTTGC CGGTTGTGGG CCGGTATTCC AGCTGTGCCG CAGCTTCCGT
AATGAAGAGA TGGGGCGTTA TCACAACCCT GAGTTCACTA TGCTGGAGTG GTATCGACCG
CACTATGATA TGTACCGGTT GATGAACGAG GTGGACGATC TCTTACAACA GGTGCTGGAC
TGCCCGGCAG CAGAAAGCCT TTCTTATCAA CAAGCTTTCT TGCGTTATCT GGAAATTGAC
CCGCTCTCTG CCGACAAAAC GCAACTGCGG GAAGTCGCAG CGAAACTGGA TTTGAGCAAT
GTTGCTGATA CCGAAGAAGA CCGCGACACG CTGCTACAAT TGCTGTTTAC CTTTGGCGTA
GAGCCAAATA TTGGCAAAGA AAAACCGACC TTTGTGTACC ACTTTCCAGC CAGCCAGGCA
TCACTGGCGC AAATCAGTAC CGAAGATCAT CGGGTCGCTG AACGCTTTGA GGTTTATTAT
AAAGGTATTG AGCTGGCGAA TGGTTTCCAT GAATTGACGG ATGCCCGTGA GCAGCAACAA
CGCTTTGAAC AAGATAACCG TAAGCGCGCG GCGCGCGGTT TGCCGCAGCA CCCCATTGAC
CAGAATCTGA TTGAAGCCTT GAAAGTCGGT ATGCCTGACT GTTCCGGCGT GGCATTAGGT
GTTGATCGTC TGGTGATGTT GGCGCTGGGC GCGGAGACAC TGGCTGAAGT CATCGCCTTT
AGCGTTGACC GGGCATAA
 
Protein sequence
MSETASWQPS ASIPNLLKRA AIMAEIRRFF ADRGVLEVET PCMSQATVTD IHLVPFETRF 
VGPGHSQGMN LWLMTSPEYH MKRLLVAGCG PVFQLCRSFR NEEMGRYHNP EFTMLEWYRP
HYDMYRLMNE VDDLLQQVLD CPAAESLSYQ QAFLRYLEID PLSADKTQLR EVAAKLDLSN
VADTEEDRDT LLQLLFTFGV EPNIGKEKPT FVYHFPASQA SLAQISTEDH RVAERFEVYY
KGIELANGFH ELTDAREQQQ RFEQDNRKRA ARGLPQHPID QNLIEALKVG MPDCSGVALG
VDRLVMLALG AETLAEVIAF SVDRA