| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A4395 |
|---|
| Symbol | frdD |
|---|
| ID | 5593544 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli HS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009800 |
|---|
| Strand | - |
|---|
| Start bp | 4404303 |
|---|
| End bp | 4404662 |
|---|
| Gene Length | 360 bp |
|---|
| Protein Length | 119 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 640923493 |
|---|
| Product | fumarate reductase subunit D |
|---|
| Protein accession | YP_001460937 |
|---|
| Protein GI | 157163619 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG3080] Fumarate reductase subunit D |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 71 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTAATC CAAATCCAAA GCGTTCTGAC GAACCGGTAT TCTGGGGCCT CTTCGGGGCC
GGTGGTATGT GGAGCGCAAT TATTGCGCCG GTGATGATCC TGCTGGTGGG TATTCTGCTG
CCACTGGGGC TGTTTCCGGG TGATGCGCTG AGCTACGAGC GCGTTCTGGC GTTCGCGCAG
AGCTTCATTG GTCGCGTATT CCTGTTCCTG ATGATCGTTC TGCCGCTGTG GTGTGGTTTA
CACCGTATGC ACCACGCGAT GCACGATCTG AAAATTCACG TGCCTGCGGG CAAATGGGTT
TTCTACGGTC TGGCTGCTAT CCTGACAGTT GTCACGCTGA TTGGTATCGT TACAATCTAA
|
|---|
| Protein sequence | MINPNPKRSD EPVFWGLFGA GGMWSAIIAP VMILLVGILL PLGLFPGDAL SYERVLAFAQ
SFIGRVFLFL MIVLPLWCGL HRMHHAMHDL KIHVPAGKWV FYGLAAILTV VTLIGIVTI
|
|---|
| |