Gene EcHS_A4393 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A4393 
Symbolblc 
ID5593542 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp4402485 
End bp4403018 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content53% 
IMG OID640923491 
Productouter membrane lipoprotein Blc 
Protein accessionYP_001460935 
Protein GI157163617 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3040] Bacterial lipocalin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones73 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCCTGC TCCCTCTCGT TGCCGCAGCG ACAGCTGCAT TTCTGGTCGT TGCCTGCAGT 
TCTCCTACGC CGCCGCGTGG CGTAACAGTA GTGAATAATT TCGACGCCAA ACGTTATCTC
GGTACCTGGT ATGAGATTGC CCGTTTTGAT CACCGTTTTG AACGTGGACT GGAAAAAGTC
ACCGCAACAT ACAGCCTGCG TGATGACGGC GGCCTGAATG TCATTAATAA AGGCTATAAC
CCTGACAGAG GAATGTGGCA GCAGAGTGAA GGGAAAGCGT ACTTTACCGG CGCACCAACT
CGCGCTGCGC TGAAAGTGTC ATTCTTTGGT CCTTTCTATG GCGGTTATAA CGTTATTGCA
CTCGATCGGG AATACCGCCA TGCGCTGGTT TGCGGCCCGG ACCGCGACTA CCTGTGGATA
CTCTCCCGCA CGCCAACCAT TTCTGACGAA GTGAAACAGG AGATGCTGGC AGTCGCGACC
CGGGAAGGGT TTGATGTCAG TAAGTTTATT TGGGTACAGC AGCCCGGTAG TTAG
 
Protein sequence
MRLLPLVAAA TAAFLVVACS SPTPPRGVTV VNNFDAKRYL GTWYEIARFD HRFERGLEKV 
TATYSLRDDG GLNVINKGYN PDRGMWQQSE GKAYFTGAPT RAALKVSFFG PFYGGYNVIA
LDREYRHALV CGPDRDYLWI LSRTPTISDE VKQEMLAVAT REGFDVSKFI WVQQPGS