| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A4388 |
|---|
| Symbol | |
|---|
| ID | 5592944 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli HS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009800 |
|---|
| Strand | - |
|---|
| Start bp | 4399926 |
|---|
| End bp | 4400954 |
|---|
| Gene Length | 1029 bp |
|---|
| Protein Length | 342 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 640923486 |
|---|
| Product | KamA family protein |
|---|
| Protein accession | YP_001460930 |
|---|
| Protein GI | 157163612 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1509] Lysine 2,3-aminomutase |
|---|
| TIGRFAM ID | [TIGR00238] KamA family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 61 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCATA TTGTAACCCT AAATACCCCA TCCAGAGAAG ATTGGTTAAC GCAACTTGCC
GATGTTGTGA CCGATCCTGA TGAACTTCTG CGTCTTTTGA ATATAGACGC GGACGAAAAA
CTGTTGGCCG GACGCAGCGC CAAAAAGCTG TTTGCCCTGC GTGTGCCCCG CTCATTTATC
GATCGCATGG AGAAAGGCAA TCCGGACGAT CCTCTTTTGC GTCAGGTACT TACCTCGCAA
GATGAGTTTG TCGTCGCGTC CGGATTCTCC ACCGACCCGC TGGAAGAACA GCACAGCGTA
GTGCCTGGTT TGTTGCATAA ATACCACAAC CGGGCGCTTT TGCTGGTCAA AGGCGGCTGC
GCGGTAAATT GCCGCTATTG CTTCCGTCGC CACTTCCCCT ATGCCGAAAA TCAGGGCAAC
AAGCGTAACT GGCAGACTGC TCTTGAGTAT GTTGCTGCGC ATCCGGAACT GGACGAGATG
ATTTTCTCCG GCGGCGATCC GCTGATGGCG AAAGATCACG AGCTGGACTG GTTGCTCACA
CAACTGGAAG CCATCCCGCA TATCAAACGT CTGCGGATTC ACAGCCGTCT GCCGATTGTG
ATCCCGGCAC GTATCACCGA GGCGCTGGTT GAACGCTTTG CCCGTTCTAC GCTGCAAATC
TTGCTGGTGA ATCACATCAA TCATGCCAAT GAGGTAGATG AAACGTTCCG TCAGGCGATG
GCTAAATTGC GCCGTGTCGG TGTCACCCTG CTTAACCAGA GCGTTCTGTT ACGTGGTGTG
AACGATAACG CACAAACGTT GGCAAACCTG AGTAATGCGT TGTTCGATGC CGGCGTGATG
CCGTATTACC TGCATGTGCT AGATAAAGTA CAGGGCGCGG CGCATTTTAT GGTGAGTGAT
GACGAAGCAC GGCAGATTAT GCGTGAGTTG CTGACATTGG TGTCGGGATA TCTGGTGCCG
AAACTGGCGC GAGAAATTGG CGGCGAACCC AGCAAAACGC CGCTGGATCT CCAGCTACGC
CAGCAGTAA
|
|---|
| Protein sequence | MAHIVTLNTP SREDWLTQLA DVVTDPDELL RLLNIDADEK LLAGRSAKKL FALRVPRSFI
DRMEKGNPDD PLLRQVLTSQ DEFVVASGFS TDPLEEQHSV VPGLLHKYHN RALLLVKGGC
AVNCRYCFRR HFPYAENQGN KRNWQTALEY VAAHPELDEM IFSGGDPLMA KDHELDWLLT
QLEAIPHIKR LRIHSRLPIV IPARITEALV ERFARSTLQI LLVNHINHAN EVDETFRQAM
AKLRRVGVTL LNQSVLLRGV NDNAQTLANL SNALFDAGVM PYYLHVLDKV QGAAHFMVSD
DEARQIMREL LTLVSGYLVP KLAREIGGEP SKTPLDLQLR QQ
|
|---|
| |