Gene EcHS_A4358 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A4358 
SymboladiA 
ID5594345 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp4362275 
End bp4364545 
Gene Length2271 bp 
Protein Length756 aa 
Translation table11 
GC content53% 
IMG OID640923456 
Productbiodegradative arginine decarboxylase 
Protein accessionYP_001460901 
Protein GI157163583 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1982] Arginine/lysine/ornithine decarboxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value0.959174 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGAAAG TATTAATTGT TGAAAGCGAG TTTCTCCATC AAGACACCTG GGTCGGTAAC 
GCCGTTGAGC GTCTGGCAGA TGCTTTAAGC CAGCAAAATG TTACCGTGAT TAAATCCACC
TCCTTTGATG ATGGTTTTGC CATTCTCTCT TCAAACGAAG CCATTGACTG CCTGATGTTC
AGCTATCAAA TGGAACATCC GGACGAACAT CAAAACGTCA GACAATTGAT CGGTAAGCTT
CATGAGCGCC AACAAAACGT GCCGGTCTTC CTGTTGGGCG ATCGGGAAAA AGCCCTCGCC
GCAATGGACC GGGATCTGCT GGAGCTTGTC GATGAATTCG CCTGGATTCT GGAAGATACC
GCCGACTTTA TCGCCGGACG CGCCGTTGCC GCGATGACCC GCTACCGCCA GCAGCTGTTG
CCGCCACTGT TCAGCGCGCT GATGAAATAT AGTGACATCC ATGAATATTC CTGGGCAGCG
CCAGGCCACC AGGGCGGCGT TGGTTTTACC AAAACACCCG CCGGACGTTT CTACCATGAC
TACTATGGTG AAAATCTGTT CCGCACCGAC ATGGGCATCG AACGAACTTC CCTCGGTTCT
TTGCTTGACC ATACTGGCGC ATTTGGCGAA AGCGAAAAAT ATGCCGCACG CGTATTTGGT
GCCGATCGCT CCTGGTCGGT AGTCGTCGGT ACTTCCGGCT CTAACCGCAC CATCATGCAG
GCTTGCATGA CCGATAACGA TGTCGTGGTC GTTGACCGTA ACTGCCATAA ATCCATCGAA
CAAGGTTTGA TGCTGACAGG CGCGAAACCG GTCTATATGG TGCCAAGCCG CAACCGCTAC
GGCATTATCG GGCCAATCTA TCCGCAGGAA ATGCAACCTG AAACCTTGCA GAAGAAAATC
AGTGAAAGCC CGCTGACCAA AGACAAAGCC GGGCAAAAAC CGTCTTACTG CGTGGTGACC
AACTGCACCT ATGACGGCGT GTGTTATAAC GCTAAAGAAG CGCAGGATCT GCTGGAAAAA
ACCTCCGATC GTCTGCACTT TGACGAAGCC TGGTACGGCT ATGCACGTTT CAACCCGATC
TATGCCGATC ACTATGCCAT GCGCGGCGAA CCTGGCGATC ACAACGGTCC TACCGTTTTC
GCCACCCACT CCACCCACAA ACTGCTGAAT GCGCTGTCAC AGGCTTCTTA TATTCATGTA
CGTGAAGGTC GTGGGGCGAT TAACTTCTCC CGCTTCAACC AGGCCTACAT GATGCATGCC
ACCACCTCCC CGCTGTATGC CATCTGCGCA TCCAACGACG TGGCGGTGTC GATGATGGAC
GGCAACAGCG GCCTGTCACT GACACAGGAA GTGATTGACG AAGCGGTTGA TTTCCGTCAG
GCGATGGCGC GGCTATATAA AGAGTTCACC GCTGACGGTA GCTGGTTCTT CAAACCGTGG
AACAAAGAAG TCGTCACCGA CCCACAAACC GGCAAAACCT ATGACTTTGC TGACGCACCA
ACCAAACTGC TGACCACCGT TCAGGACTGC TGGGTAATGC ATCCGGGCGA AAGCTGGCAC
GGCTTCAAAG ATATTCCGGA TAACTGGAGT ATGCTCGACC CAATTAAAGT CAGCATCCTT
GCTCCGGGAA TGGGTGAAGA TGGTGAACTG GAAGAAACCG GTGTTCCGGC GGCGCTGGTC
ACTGCCTGGC TTGGTCGCCA CGGCATTGTG CCTACCCGCA CCACTGACTT CCAAATTATG
TTCCTGTTCT CTATGGGCGT AACCCGTGGG AAATGGGGGA CTCTGGTTAA CACCCTTTGC
TCCTTCAAAC GCCACTATGA CGCCAACACA CCGCTGGCGC AGGTGATGCC GGAACTTGTT
GAACAATATC CTGACACTTA CGCGAACATG GGGATTCACG ATCTGGGTGA CACCATGTTT
GCCTGGCTGA AAGAAAACAA CCCTGGCGCA CGGTTGAACG AAGCCTATTC CGGCCTGCCG
ATGGCGGAAA TCACCCCGCG TGAAGCGTAC AACGCGATTG TCGACAACAA TGTCGAACTG
GTATCCATTG AAAATCTGCC AGGACGCATC GCGGCAAACT CAGTTATCCC ATATCCGCCA
GGAATCCCGA TGCTGCTGTC TGGTGAAAAC TTCGGCGATA AAAACAGTCC GCAAGTAAGT
TATTTACGCT CGCTGCAATC CTGGGACCAC CATTTCCCTG GATTTGAACA CGAAACTGAA
GGGACTGAAA TTATTGACGG TATTTACCAC GTTATGTGTG TGAAAGCGTA A
 
Protein sequence
MMKVLIVESE FLHQDTWVGN AVERLADALS QQNVTVIKST SFDDGFAILS SNEAIDCLMF 
SYQMEHPDEH QNVRQLIGKL HERQQNVPVF LLGDREKALA AMDRDLLELV DEFAWILEDT
ADFIAGRAVA AMTRYRQQLL PPLFSALMKY SDIHEYSWAA PGHQGGVGFT KTPAGRFYHD
YYGENLFRTD MGIERTSLGS LLDHTGAFGE SEKYAARVFG ADRSWSVVVG TSGSNRTIMQ
ACMTDNDVVV VDRNCHKSIE QGLMLTGAKP VYMVPSRNRY GIIGPIYPQE MQPETLQKKI
SESPLTKDKA GQKPSYCVVT NCTYDGVCYN AKEAQDLLEK TSDRLHFDEA WYGYARFNPI
YADHYAMRGE PGDHNGPTVF ATHSTHKLLN ALSQASYIHV REGRGAINFS RFNQAYMMHA
TTSPLYAICA SNDVAVSMMD GNSGLSLTQE VIDEAVDFRQ AMARLYKEFT ADGSWFFKPW
NKEVVTDPQT GKTYDFADAP TKLLTTVQDC WVMHPGESWH GFKDIPDNWS MLDPIKVSIL
APGMGEDGEL EETGVPAALV TAWLGRHGIV PTRTTDFQIM FLFSMGVTRG KWGTLVNTLC
SFKRHYDANT PLAQVMPELV EQYPDTYANM GIHDLGDTMF AWLKENNPGA RLNEAYSGLP
MAEITPREAY NAIVDNNVEL VSIENLPGRI AANSVIPYPP GIPMLLSGEN FGDKNSPQVS
YLRSLQSWDH HFPGFEHETE GTEIIDGIYH VMCVKA