Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcHS_A4353 |
Symbol | basR |
ID | 5594379 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli HS |
Kingdom | Bacteria |
Replicon accession | NC_009800 |
Strand | - |
Start bp | 4357303 |
End bp | 4357971 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640923451 |
Product | DNA-binding transcriptional regulator BasR |
Protein accession | YP_001460896 |
Protein GI | 157163578 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 51 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATTC TGATTGTTGA AGACGATACG CTGTTATTGC AGGGATTGAT TCTGGCGGCG CAAACTGAAG GCTACGCGTG CGATGGCGTG ACAACCGCGC GGATGGCGGA ACAAAGCCTT GAGGCCGGTC ATTACAGCCT GGTGGTACTG GATTTAGGGT TACCCGACGA AGATGGACTG CATTTTCTCG CCCGTATCCG GCAGAAAAAA TACACCCTGC CGGTACTGAT CCTCACCGCT CGCGATACGC TGACCGACAA AATCGCCGGG CTGGATGTCG GTGCCGATGA CTATCTGGTG AAGCCCTTTG CGCTGGAAGA GTTACACGCC CGTATCCGAG CCCTGCTACG ACGCCATAAT AATCAGGGCG AAAGTGAGCT GATTGTTGGC AATCTGACGC TGAATATGGG TCGCCGTCAG GTATGGATGG GCGGTGAAGA GTTGATTCTG ACGCCCAAAG AATATGCTCT GCTGTCACGG TTAATGCTCA AAGCAGGCAG TCCGGTGCAT CGGGAAATTC TCTACAACGA CATCTATAAC TGGGACAATG AACCCTCGAC CAACACCCTG GAAGTGCATA TCCACAATCT GCGCGACAAA GTGGGCAAAG CCCGTATCCG CACCGTGCGC GGCTTTGGCT ATATGCTGGT CGCGAATGAG GAAAACTAA
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Protein sequence | MKILIVEDDT LLLQGLILAA QTEGYACDGV TTARMAEQSL EAGHYSLVVL DLGLPDEDGL HFLARIRQKK YTLPVLILTA RDTLTDKIAG LDVGADDYLV KPFALEELHA RIRALLRRHN NQGESELIVG NLTLNMGRRQ VWMGGEELIL TPKEYALLSR LMLKAGSPVH REILYNDIYN WDNEPSTNTL EVHIHNLRDK VGKARIRTVR GFGYMLVANE EN
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