Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcHS_A4352 |
Symbol | basS |
ID | 5594378 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli HS |
Kingdom | Bacteria |
Replicon accession | NC_009800 |
Strand | - |
Start bp | 4356202 |
End bp | 4357293 |
Gene Length | 1092 bp |
Protein Length | 363 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640923450 |
Product | sensor protein BasS/PmrB |
Protein accession | YP_001460895 |
Protein GI | 157163577 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 53 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCATTTTC TGCGCCGACC AATATCGCTG CGCCAACGGC TGATATTGAC CATCGGGGCC ATTTTGTTGG TGTTTGAGCT GATCAGCGTC TTCTGGCTAT GGCATGAAAG TACCGAGCAG ATTCAGCTGT TTGAGCAGGC GCTACGCGAC AATCGCAACA ACGATCGCCA CATCATGCGT GAGATCCGCG AGGCGGTCGC CAGCCTGATT GTCCCCGGCG TCTTTATGGT CAGCCTGACG CTATTTATCT GCTATCAGGC GGTACGCCGC ATCACTCGCC CGCTGGCGGA GCTGCAAAAA GAGCTGGAAG CGCGCACCGC CGACAACTTA ACGCCCATTG CCATTCACAG CGCCACCCTC GAAATCGAAG CGGTGGTTTC GGCGTTGAAC GATCTGGTCA GTCGCCTGAC CAGCACGCTG GATAACGAAA GGTTGTTTAC CGCTGACGTC GCGCACGAAC TGCGAACGCC ACTGGCTGGG GTGCGTTTGC ATCTGGAACT GCTGGCGAAA ACGCATCACA TTGATGTAGC ACCGTTAGTG GCACGGCTTG ATCAGATGAT GGAGAGCGTC TCCCAGCTGC TGCAACTGGC GCGTGCCGGA CAGTCATTTT CTTCCGGTAA TTATCAACAT GTAAAACTGC TGGAAGATGT CATTCTCCCC TCGTATGACG AACTCAGTAC CATGCTCGAC CAGCGACAGC AAACCCTGCT ATTGCCAGAG AGCGCCGCCG ACATCACCGT TCAGGGTGAT GCAACCCTGC TGCGGATGTT ATTGCGAAAC CTGGTAGAAA ACGCCCATCG TTACAGCCCG CAAGGCAGCA ACATTATGAT TAAGCTGCAA GAAGATGGCG GAGCGGTCAT GGCAGTTGAA GATGAAGGAC CAGGTATTGA TGAGAGTAAA TGCGGGGAGT TGAGTAAAGC GTTTGTACGT ATGGACAGCC GTTATGGCGG GATTGGTCTG GGGTTAAGTA TTGTCAGCCG CATTACACAG TTGCATCACG GGCAGTTTTT CCTGCAAAAC CGGCAAGAGA CTTCCGGCAC GCGGGCCTGG GTACGGCTGA AGAAAGATCA GAACGTGGCA AACCAGATAT AA
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Protein sequence | MHFLRRPISL RQRLILTIGA ILLVFELISV FWLWHESTEQ IQLFEQALRD NRNNDRHIMR EIREAVASLI VPGVFMVSLT LFICYQAVRR ITRPLAELQK ELEARTADNL TPIAIHSATL EIEAVVSALN DLVSRLTSTL DNERLFTADV AHELRTPLAG VRLHLELLAK THHIDVAPLV ARLDQMMESV SQLLQLARAG QSFSSGNYQH VKLLEDVILP SYDELSTMLD QRQQTLLLPE SAADITVQGD ATLLRMLLRN LVENAHRYSP QGSNIMIKLQ EDGGAVMAVE DEGPGIDESK CGELSKAFVR MDSRYGGIGL GLSIVSRITQ LHHGQFFLQN RQETSGTRAW VRLKKDQNVA NQI
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