Gene EcHS_A4345 details

Gene Information

• Locus tag: EcHS_A4345
• Symbol: phnD
• ID: 5594419
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli HS
• Kingdom: Bacteria
• Replicon accession: NC_009800
• Strand: -
• Start bp: 4347854
• End bp: 4348870
• Gene Length: 1017 bp
• Protein Length: 338 aa
• Translation table: 11
• GC content: 54%
• IMG OID: 640923443
• Product: phosphonate ABC transporter, periplasmic phosphonate-binding protein
• Protein accession: YP_001460888
• Protein GI: 157163570
• COG category: [P] Inorganic ion transport and metabolism
• COG ID: [COG3221] ABC-type phosphate/phosphonate transport system, periplasmic component
• TIGRFAM ID: [TIGR01098] phosphate/phosphite/phosphonate ABC transporters, periplasmic binding protein; [TIGR03431] phosphonate ABC transporter, periplasmic phosphonate binding protein

Plasmid Coverage information

• Num covering plasmid clones: 80
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACGCTA AGATAATTGC CTCGCTGGCC TTCACCAGCA TGTTCAGCCT CAGCACCCTG 
TTAAGCCCGG CACACGCCGA AGAGCAGGAA AAGGCGCTGA ATTTCGGCAT TATTTCAACG 
GAATCACAGC AAAACCTTAA ACCGCAATGG ACGCCATTCT TACAGGATAT GGAGAAGAAG 
CTGGGCGTGA AGGTGAACGC CTTCTTTGCC CCAGACTACG CAGGCATTAT CCAGGGAATG 
CGCTTCAATA AAGTGGATAT CGCCTGGTAC GGCAACCTGT CGGCAATGGA AGCGGTGGAT 
CGCGCCAACG GCCAAGTCTT CGCCCAGACG GTCGCGGCGG ATGGATCGCC AGGTTACTGG 
AGCGTGTTGA TCGTCAACAA AGATAGTCCG ATCAACAACC TGAACGATCT GCTGGCGAAG 
CGGAAAGATC TCACCTTCGG CAATGGCGAT CCTAACTCCA CCTCTGGCTT CCTCGTCCCC 
GGTTACTACG TCTTTGCCAA AAACAATATC TCCGCCAGCG ACTTTAAGCG CACCGTCAAC 
GCTGGGCATG AAACCAACGC GCTGGCCGTC GCCAACAAGC AGGTGGATGT TGCCACCAAC 
AACACCGAAA ACCTCGACAA GCTGAAAACC TCCGCGCCAG AGAAGCTGAA AGAACTGAAG 
GTGATCTGGA AGTCGCCGCT GATCCCAGGC GATCCGATCG TCTGGCGCAA GAATCTCTCC 
GAAACCACCA AAGACAAGAT CTACGACTTC TTTATGAACT ACGGAAAAAC GCCGGAAGAG 
AAAGCGGTGC TGGAACGCCT GGGCTGGGCC CCGTTCCGCG CCTCCAGCGA CCTGCAACTG 
GTGCCGATTC GCCAGCTCGC ACTGTTTAAA GAGATGCAGG GCGTAAAAAG CAATAAAGGA 
CTGAATGAGC AGGACAAGCT GGCGAAAACC ACCGAGATTC AGGCGCAGCT GGATGACCTG 
GACCGCCTGA ACAACGCGTT AAGCGCGATG AGTTCGGTGA GTAAAGCGGT GCAGTAA 

 

Protein sequence

MNAKIIASLA FTSMFSLSTL LSPAHAEEQE KALNFGIIST ESQQNLKPQW TPFLQDMEKK 
LGVKVNAFFA PDYAGIIQGM RFNKVDIAWY GNLSAMEAVD RANGQVFAQT VAADGSPGYW 
SVLIVNKDSP INNLNDLLAK RKDLTFGNGD PNSTSGFLVP GYYVFAKNNI SASDFKRTVN 
AGHETNALAV ANKQVDVATN NTENLDKLKT SAPEKLKELK VIWKSPLIPG DPIVWRKNLS 
ETTKDKIYDF FMNYGKTPEE KAVLERLGWA PFRASSDLQL VPIRQLALFK EMQGVKSNKG 
LNEQDKLAKT TEIQAQLDDL DRLNNALSAM SSVSKAVQ