Gene EcHS_A4323 details

Gene Information

• Locus tag: EcHS_A4323
• ID: 5591330
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli HS
• Kingdom: Bacteria
• Replicon accession: NC_009800
• Strand: -
• Start bp: 4327638
• End bp: 4328327
• Gene Length: 690 bp
• Protein Length: 229 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 640923421
• Product: Sel1 repeat-containing protein
• Protein accession: YP_001460866
• Protein GI: 157163548
• COG category: [R] General function prediction only
• COG ID: [COG0790] FOG: TPR repeat, SEL1 subfamily

Plasmid Coverage information

• Num covering plasmid clones: 71
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAAAA TTATCGCATT GATGTTGTTT TTGACATTCT TTGCCCACGC GAACGACTCC 
GAGCCTGGCA GCCAGTATTT AAAGGCAGCA GAGGCCGGGG ACCGACGCGC ACAATATTTT 
CTTGCCGACA GCTGGTTTAG CTCCGGCGAT TTGAGCAAAG CCGAATATTG GGCACAGAAA 
GCCGCCGACA GCGGTGATGC TGATGCCTGC GCGCTGCTGG CGCAGATCAA AATCACCAAT 
CCGGTCAGTC TGGACTATCC ACAAGCAAAA GTTCTTGCAG AGAAAGCGGC GCAAGCGGGC 
AGTAAAGAAG GTGAAGTAAC GCTGGCGCAT ATTCTGGTAA ATACTCAAGC GGGTAAACCG 
GATTATCCAA AGGCGATTTC GCTGTTAGAA AACGCCTCGG AAGATCTGGA GAATGACTCC 
GCCGTCGATG CCCAAATGCT GCTTGGTTTG ATTTACGCCA ACGGCGTGGG CATTAAGGCC 
GACGATGACA AGGCAACCTG GTATTTCAAA CGCAGCTCTG CAATTTCCCG AACCGGTTAT 
TCCGAGTACT GGGCGGGAAT GATGTTCTTA AACGGTGAGG AAGGTTTTAT CGAGAAGAAC 
AAACAAAAGG CGCTGCACTG GTTGAACCTG AGCTGTATGG AAGGGTTTGA TACCGGGTGT 
GAAGAGTTTG AAAAATTAAC CAACGGTTAA 

 

Protein sequence

MKKIIALMLF LTFFAHANDS EPGSQYLKAA EAGDRRAQYF LADSWFSSGD LSKAEYWAQK 
AADSGDADAC ALLAQIKITN PVSLDYPQAK VLAEKAAQAG SKEGEVTLAH ILVNTQAGKP 
DYPKAISLLE NASEDLENDS AVDAQMLLGL IYANGVGIKA DDDKATWYFK RSSAISRTGY 
SEYWAGMMFL NGEEGFIEKN KQKALHWLNL SCMEGFDTGC EEFEKLTNG