Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcHS_A4311 |
Symbol | actP |
ID | 5591542 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli HS |
Kingdom | Bacteria |
Replicon accession | NC_009800 |
Strand | - |
Start bp | 4315018 |
End bp | 4316667 |
Gene Length | 1650 bp |
Protein Length | 549 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640923409 |
Product | acetate permease |
Protein accession | YP_001460854 |
Protein GI | 157163536 |
COG category | [R] General function prediction only |
COG ID | [COG4147] Predicted symporter |
TIGRFAM ID | [TIGR00813] transporter, SSS family [TIGR02711] cation/acetate symporter ActP |
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Plasmid Coverage information |
Num covering plasmid clones | 48 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAGAG TTCTGACGGC GCTTGCCGCC ACACTCCCTT TCGCAGCTAA CGCCGCGGAT GCTATTAGCG GGGCCGTAGA GCGCCAGCCA ACGAACTGGC AGGCGATTAT TATGTTCCTG ATTTTCGTCG TGTTTACGCT CGGCATTACC TACTGGGCAT CAAAACGCGT ACGTTCTCGT AGCGACTACT ACACCGCAGG CGGCAATATC ACTGGCTTCC AGAACGGGCT GGCGATTGCC GGGGACTATA TGTCCGCCGC CTCATTCTTG GGGATCTCCG CGCTGGTGTT TACCTCCGGC TATGACGGCT TAATTTACTC GCTGGGCTTC CTGGTGGGCT GGCCGATCAT TTTGTTCCTG ATTGCCGAAC GTCTGCGTAA CCTGGGGCGC TACACCTTTG CCGATGTGGC CTCTTACCGT CTGAAACAAG GGCCGATTCG TATTCTTTCG GCCTGTGGTT CTCTGGTGGT GGTGGCGCTT TACCTTATCG CCCAGATGGT GGGCGCAGGT AAACTGATCG AGCTGCTGTT TGGCCTTAAC TATCACATTG CGGTGGTGCT GGTCGGCGTG CTGATGATGA TGTACGTCCT GTTCGGCGGC ATGCTGGCGA CCACTTGGGT ACAGATTATC AAAGCCGTGC TGTTGCTGTT CGGTGCCAGC TTTATGGCCT TTATGGTGAT GAAACACGTC GGCTTTAGCT TCAACAATCT GTTCAGTGAA GCGATGGCGG TACACCCGAA AGGTGTCGAC ATCATGAAGC CGGGCGGGCT GGTGAAAGAT CCGATCTCCG CGCTCTCTCT GGGTCTGGGA CTGATGTTTG GTACGGCGGG CTTGCCGCAC ATTCTGATGC GCTTCTTTAC AGTCAGCGAT GCCCGCGAAG CACGTAAGAG CGTGTTCTAC GCCACCGGGT TTATGGGCTA CTTCTATATT CTGACCTTTA TTATCGGCTT CGGCGCGATC ATGCTGGTTG GTGCGAATCC GGAATATAAA GACGCGGCGG GCCATCTGAT TGGTGGTAAC AACATGGCGG CCGTTCACCT GGCGAATGCA GTGGGCGGCA ACCTGTTCCT CGGTTTTATT TCAGCGGTTG CTTTTGCCAC CATTCTTGCG GTGGTTGCTG GTCTGACGCT GGCGGGCGCA TCAGCGGTTT CGCATGACCT GTACGCTAAC GTCTTCAAAA AAGGCGCGAC CGAACGTGAA GAACTGCGGG TATCGAAAAT CACCGTGCTG ATTTTAGGTG TGATTGCCAT TATCCTCGGC GTGCTGTTTG AGAATCAGAA CATCGCCTTC ATGGTAGGCC TGGCGTTTGC CATCGCAGCG AGCTGTAACT TCCCGATCAT TCTGCTTTCT ATGTACTGGT CGAAACTGAC CACTCGTGGC GCGATGATGG GTGGCTGGCT GGGGCTGATT ACCGCAGTGG TACTGATGAT CCTCGGCCCG ACGATTTGGG TACAGATCCT TGGTCACGAA AAAGCCATCT TCCCGTATGA ATACCCGGCG CTGTTCTCTA TCAGCGTGGC ATTCCTCGGC ATCTGGTTCT TCTCGGCAAC CGATAACTCA GCGGAAGGTG CGCGCGAGCG TGAACTGTTC CGTGCACAGT TTATCCGCTC CCAGACCGGC TTTGGCGTTG AGCAAGGCCG CGCACATTAA
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Protein sequence | MKRVLTALAA TLPFAANAAD AISGAVERQP TNWQAIIMFL IFVVFTLGIT YWASKRVRSR SDYYTAGGNI TGFQNGLAIA GDYMSAASFL GISALVFTSG YDGLIYSLGF LVGWPIILFL IAERLRNLGR YTFADVASYR LKQGPIRILS ACGSLVVVAL YLIAQMVGAG KLIELLFGLN YHIAVVLVGV LMMMYVLFGG MLATTWVQII KAVLLLFGAS FMAFMVMKHV GFSFNNLFSE AMAVHPKGVD IMKPGGLVKD PISALSLGLG LMFGTAGLPH ILMRFFTVSD AREARKSVFY ATGFMGYFYI LTFIIGFGAI MLVGANPEYK DAAGHLIGGN NMAAVHLANA VGGNLFLGFI SAVAFATILA VVAGLTLAGA SAVSHDLYAN VFKKGATERE ELRVSKITVL ILGVIAIILG VLFENQNIAF MVGLAFAIAA SCNFPIILLS MYWSKLTTRG AMMGGWLGLI TAVVLMILGP TIWVQILGHE KAIFPYEYPA LFSISVAFLG IWFFSATDNS AEGARERELF RAQFIRSQTG FGVEQGRAH
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