Gene EcHS_A4308 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A4308 
Symbol 
ID5591294 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp4311745 
End bp4313394 
Gene Length1650 bp 
Protein Length549 aa 
Translation table11 
GC content56% 
IMG OID640923408 
ProductNa+/H+ antiporter 
Protein accessionYP_001460853 
Protein GI157163535 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0025] NhaP-type Na+/H+ and K+/H+ antiporters 
TIGRFAM ID[TIGR00831] Na+/H+ antiporter, bacterial form 


Plasmid Coverage information

Num covering plasmid clones49 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAATCT TCTTCACCAT ACTGATAATG ACCCTCGTGG TCTCGCTGTC CGGGGTGGTC 
ACTCGTGTCA TGCCCTTTCA GATCCCGCTT CCGCTTATGC AAATCGCCAT CGGTGCGCTA
CTGGCGTGGC CGACGTTTGG TTTGCATGTG GAGTTTGATC CTGAACTCTT TTTAGTCTTG
TTTATCCCGC CGTTGCTGTT CGCTGATGGC TGGAAAACGC CGACCCGTGA ATTTCTCGAA
CATGGTCGAG AGATTTTTGG CCTCGCGCTG GCGCTGGTGG TGGTCACCGT GGTCGGCATT
GGCTTCCTTA TTTACTGGGT GGTGCCGGGC ATTCCGCTGA TCCCCGCCTT TGCGCTGGCG
GCAGTGCTTT CTCCGACCGA TGCTGTGGCG CTCTCCGGGA TTGTTGGCGA AGGGCGCATC
CCGAAAAAAA TCATGGGTAT TTTGCAGGGC GAAGCGTTGA TGAATGACGC CTCCGGCCTG
GTGTCGTTGA AGTTTGCCGT GGCAGTGGCG ATGGGGACGA TGATCTTCAC CGTTGGCGGT
GCGACGGTCG AATTTATGAA AGTAGCCATT GGCGGTATTC TCGCCGGCTT TGTGGTGAGC
TGGCTGTATG GTCGCTCGCT GCGATTCCTC AGCCGCTGGG GCGGTGATGA ACCCGCGACG
CAGATCGTTC TGCTGTTCTT GCTGCCATTC GCTTCTTATC TGATTGCCGA ACATATTGGC
GTTTCCGGCA TCCTCGCTGC GGTTGCCGCC GGGATGACCA TCACCCGCTC CGGTGTGATG
CGCCGTGCGC CGCTGGCAAT GCGCCTGCGC GCAAACAGCA CCTGGGCGAT GCTGGAATTT
GTCTTTAACG GCATGGTGTT CCTGCTGTTA GGTCTGCAGC TGCCGGGTAT TCTGGAGACG
TCGCTGATGG CGGCAGAAAT CGACCCTAAC GTCGAAATCT GGATGCTGTT TACCGATATT
ATTCTGATAT ATGCGGCGCT GATGCTGGTC CGTTTCGGCT GGCTGTGGAC GATGAAAAAG
TTCAGCAACC GCTTCCTGAA GAAGAAGCCG ATGGAGTTTG GTTCGTGGAC CACACGAGAA
ATCCTGATCG CGTCTTTCGC CGGGGTGCGT GGGGCGATCA CTCTGGCCGG TGTGCTCTCT
ATCCCGCTGC TCTTGCCGGA TGGTAACGTC TTCCCGGCGC GCTATGAGCT GGTGTTCCTG
GCGGCTGGCG TCATTCTCTT CTCGCTGTTT GTCGGCGTGG TGATGTTGCC TATTCTGCTA
CAACACATTG AAGTCGCGGA CCATTCGCAA CAATTGAAAG AAGAACGTAT TGCGCGAGCG
GCAACGGCAG AAGTGGCGAT TGTGGCGATC CAGAAAATGG AGGAGCGTCT GGCGGCGGAT
ACCGAAGAGA ATATCGATAA CCAGCTGCTT ACGGAGGTCA GTTCTCGCGT CATTGGTAAC
CTGCGTCGTC GCGCCGATGG ACGTAACGAC GTTGAAAGTT CCGTGCAGGA AGAGAACCTT
GAGCGTCGCT TCCGTCTGGC GGCATTGCGT TCTGAACGTG CTGAACTGTA CCACCTGCGC
GCCACGCGGG AGATCAGCAA CGAAACGCTG CAAAAATTAC TGCACGATCT CGATTTGCTT
GAAGCGTTGC TAATTGAGGA AAATCAGTAA
 
Protein sequence
MEIFFTILIM TLVVSLSGVV TRVMPFQIPL PLMQIAIGAL LAWPTFGLHV EFDPELFLVL 
FIPPLLFADG WKTPTREFLE HGREIFGLAL ALVVVTVVGI GFLIYWVVPG IPLIPAFALA
AVLSPTDAVA LSGIVGEGRI PKKIMGILQG EALMNDASGL VSLKFAVAVA MGTMIFTVGG
ATVEFMKVAI GGILAGFVVS WLYGRSLRFL SRWGGDEPAT QIVLLFLLPF ASYLIAEHIG
VSGILAAVAA GMTITRSGVM RRAPLAMRLR ANSTWAMLEF VFNGMVFLLL GLQLPGILET
SLMAAEIDPN VEIWMLFTDI ILIYAALMLV RFGWLWTMKK FSNRFLKKKP MEFGSWTTRE
ILIASFAGVR GAITLAGVLS IPLLLPDGNV FPARYELVFL AAGVILFSLF VGVVMLPILL
QHIEVADHSQ QLKEERIARA ATAEVAIVAI QKMEERLAAD TEENIDNQLL TEVSSRVIGN
LRRRADGRND VESSVQEENL ERRFRLAALR SERAELYHLR ATREISNETL QKLLHDLDLL
EALLIEENQ