Gene EcHS_A4300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A4300 
SymboluvrA 
ID5591366 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp4302814 
End bp4305636 
Gene Length2823 bp 
Protein Length940 aa 
Translation table11 
GC content56% 
IMG OID640923400 
Productexcinuclease ABC subunit A 
Protein accessionYP_001460845 
Protein GI157163527 
COG category[L] Replication, recombination and repair 
COG ID[COG0178] Excinuclease ATPase subunit 
TIGRFAM ID[TIGR00630] excinuclease ABC, A subunit 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATAAGA TCGAAGTTCG GGGCGCCCGC ACCCATAATC TCAAAAACAT CAACCTCGTT 
ATCCCCCGCG ACAAGCTCAT TGTCGTGACC GGGCTTTCGG GTTCTGGCAA ATCCTCGCTC
GCTTTCGACA CCTTATATGC CGAAGGGCAG CGCCGTTACG TTGAATCCCT TTCCGCCTAC
GCGCGGCAGT TTCTGTCACT GATGGAAAAG CCGGACGTCG ATCATATTGA GGGGCTTTCT
CCTGCCATCT CAATTGAGCA GAAATCGACG TCTCATAACC CGCGTTCTAC GGTGGGGACA
ATCACCGAAA TCCACGACTA TTTGCGTTTG TTGTTCGCCC GCGTCGGCGA ACCGCGCTGT
CCGGACCACG ACGTCCCGCT GGCGGCGCAA ACCGTCAGCC AGATGGTGGA TAACGTGCTG
TCGCAGCCGG AAGGCAAGCG TCTGATGCTG CTCGCGCCAA TCATTAAAGA GCGCAAAGGC
GAACACACCA AAACGCTGGA GAACCTGGCA AGCCAGGGTT ACATCCGTGC TCGTATTGAT
GGCGAAGTCT GCGATCTTTC CGATCCGCCG AAACTGGAAC TGCAAAAGAA ACATACCATT
GAAGTGGTGG TTGATCGCTT CAAGGTGCGT GACGATCTTA CCCAACGTCT TGCGGAGTCG
TTTGAAACCG CGCTGGAGCT TTCCGGTGGT ACAGCGGTAG TGGCGGATAT GGACGACCCG
AAAGCGGAAG AGCTGCTGTT CTCCGCCAAC TTCGCCTGCC CAATTTGCGG CTACAGTATG
CGTGAACTGG AGCCGCGACT GTTTTCGTTT AACAACCCGG CAGGTGCCTG CCCAACCTGT
GACGGCCTTG GCGTACAGCA ATATTTCGAT CCTGACCGCG TGATCCAAAA CCCCGAGCTG
TCACTGGCTG GCGGTGCGAT CCGTGGCTGG GATCGCCGCA ACTTCTATTA CTTCCAGATG
CTGAAATCGC TGGCAGATCA CTATAAGTTC GACGTCGAAG CGCCGTGGGG CAGCCTGAGC
GCGAACGTGC ATAAAGTGGT GTTGTACGGT TCTGGCAAAG AAAACATTGA ATTCAAATAC
ATGAACGATC GTGGCGATAC CTCCATCCGT CGTCATCCGT TCGAAGGCGT GCTGCACAAT
ATGGAGCGCC GTTATAAAGA GACAGAATCC AGTGCGGTAC GTGAAGAATT AGCCAAGTTT
ATCAGCAATC GCCCATGCGC CAGCTGCGAA GGGACGCGTC TGCGTCGGGA AGCGCGCCAC
GTTTATGTCG AGAATACGCC GCTGCCTGCT ATCTCCGACA TGAGCATCGG TCATGCGATG
GAATTCTTCA ACAATCTCAA ACTCGCTGGT CAACGGGCGA AGATTGCGGA AAAAATCCTT
AAAGAGATCG GCGATCGTTT GAAATTCCTC GTTAACGTCG GCCTGAATTA CCTGACGCTT
TCCCGCTCGG CAGAAACGCT TTCCGGCGGT GAAGCCCAGC GTATCCGTCT GGCGAGCCAG
ATTGGTGCGG GCCTGGTTGG CGTTATGTAC GTGCTGGACG AGCCATCTAT CGGCCTGCAC
CAGCGCGATA ACGAGCGCCT GTTGGGTACG CTTATCCATC TGCGCGATCT CGGTAATACC
GTGATTGTGG TGGAGCACGA CGAAGACGCA ATTCGCGCCG CTGACCATGT GATCGACATT
GGCCCGGGCG CAGGTGTTCA CGGCGGTGAA GTGGTCGCAG AAGGTCCGCT GGAAGCGATT
ATGGCGGTGC CGGAGTCGTT GACCGGGCAG TACATGAGCG GTAAACGCAA GATTGAAGTG
CCGAAGAAGC GCGTTCCGGC AAATCCGGAA AAAGTGCTGA AGCTGACAGG CGCACGCGGC
AACAACCTGA AGGACGTGAC GCTCACGCTG CCAGTCGGTC TGTTTACCTG CATCACAGGG
GTTTCAGGTT CCGGTAAATC GACGCTGATT AACGACACAC TGTTCCCGAT TGCCCAACGC
CAGTTGAATG GTGCGACCAT CGCCGAACCG GCACCGTATC GCGATATTCA GGGGCTGGAG
CATTTCGATA AAGTGATCGA TATCGACCAA AGCCCAATTG GTCGTACTCC ACGTTCTAAC
CCGGCGACCT ATACCGGCGT GTTTACACCT GTGCGCGAAC TGTTTGCGGG CGTACCGGAA
TCCCGTGCGC GTGGTTATAC GCCAGGACGT TTCAGCTTTA ACGTCCGTGG CGGGCGCTGC
GAAGCCTGTC AGGGCGACGG TGTGATCAAA GTGGAGATGC ACTTCCTGCC GGATATCTAC
GTGCCGTGCG ATCAGTGCAA AGGTAAACGC TATAACCGTG AAACGCTGGA AATTAAGTAC
AAAGGCAAAA CCATCCACGA AGTGCTGGAT ATGACCATCG AAGAGGCGCG TGAGTTCTTT
GATGCGGTGC CAGCTCTGGC GCGTAAGCTG CAAACGTTGA TGGACGTTGG TCTGACGTAC
ATTCGCCTGG GGCAGTCCGC AACCACACTT TCTGGTGGTG AAGCCCAGCG CGTGAAGCTG
GCGCGTGAGC TGTCAAAACG CGGCACCGGG CAGACGCTGT ATATTCTCGA CGAGCCGACC
ACCGGTCTGC ACTTCGCCGA TATTCAGCAA CTCCTCGACG TGCTGCATAA ACTGCGCGAT
CAGGGCAATA CCATTGTGGT GATTGAGCAC AATCTCGACG TGATCAAAAC CGCTGACTGG
ATTGTCGACC TGGGACCAGA AGGCGGCAGT GGCGGCGGCG AAATCCTCGT CTCCGGTACG
CCAGAAACCG TCGCGGAGTG CGAAGCTTCG CATACGGCAC GCTTCCTCAA GCCGATGCTG
TAA
 
Protein sequence
MDKIEVRGAR THNLKNINLV IPRDKLIVVT GLSGSGKSSL AFDTLYAEGQ RRYVESLSAY 
ARQFLSLMEK PDVDHIEGLS PAISIEQKST SHNPRSTVGT ITEIHDYLRL LFARVGEPRC
PDHDVPLAAQ TVSQMVDNVL SQPEGKRLML LAPIIKERKG EHTKTLENLA SQGYIRARID
GEVCDLSDPP KLELQKKHTI EVVVDRFKVR DDLTQRLAES FETALELSGG TAVVADMDDP
KAEELLFSAN FACPICGYSM RELEPRLFSF NNPAGACPTC DGLGVQQYFD PDRVIQNPEL
SLAGGAIRGW DRRNFYYFQM LKSLADHYKF DVEAPWGSLS ANVHKVVLYG SGKENIEFKY
MNDRGDTSIR RHPFEGVLHN MERRYKETES SAVREELAKF ISNRPCASCE GTRLRREARH
VYVENTPLPA ISDMSIGHAM EFFNNLKLAG QRAKIAEKIL KEIGDRLKFL VNVGLNYLTL
SRSAETLSGG EAQRIRLASQ IGAGLVGVMY VLDEPSIGLH QRDNERLLGT LIHLRDLGNT
VIVVEHDEDA IRAADHVIDI GPGAGVHGGE VVAEGPLEAI MAVPESLTGQ YMSGKRKIEV
PKKRVPANPE KVLKLTGARG NNLKDVTLTL PVGLFTCITG VSGSGKSTLI NDTLFPIAQR
QLNGATIAEP APYRDIQGLE HFDKVIDIDQ SPIGRTPRSN PATYTGVFTP VRELFAGVPE
SRARGYTPGR FSFNVRGGRC EACQGDGVIK VEMHFLPDIY VPCDQCKGKR YNRETLEIKY
KGKTIHEVLD MTIEEAREFF DAVPALARKL QTLMDVGLTY IRLGQSATTL SGGEAQRVKL
ARELSKRGTG QTLYILDEPT TGLHFADIQQ LLDVLHKLRD QGNTIVVIEH NLDVIKTADW
IVDLGPEGGS GGGEILVSGT PETVAECEAS HTARFLKPML