| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A4273 |
|---|
| Symbol | malF |
|---|
| ID | 5594199 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli HS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009800 |
|---|
| Strand | - |
|---|
| Start bp | 4275275 |
|---|
| End bp | 4276819 |
|---|
| Gene Length | 1545 bp |
|---|
| Protein Length | 514 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 640923375 |
|---|
| Product | maltose transporter membrane protein |
|---|
| Protein accession | YP_001460820 |
|---|
| Protein GI | 157163502 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 59 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATGTCA TTAAAAAGAA ACATTGGTGG CAAAGCGACG CGCTGAAATG GTCAGTGCTA
GGTCTGCTCG GCCTGCTGGT GGGTTACCTT GTTGTTTTAA TGTACGCACA AGGGGAATAC
CTGTTCGCCA TTACCACGCT GATATTGAGT TCAGCGGGGC TGTATATTTT CGCCAATCGT
AAAGCCTACG CCTGGCGCTA TGTTTACCCG GGAATGGCTG GAATGGGATT ATTCGTCCTC
TTCCCTCTGG TCTGCACCAT CGCCATTGCC TTCACCAACT ACAGCAGCAC TAACCAGCTG
ACTTTTGAAC GTGCGCAGGA AGTGTTGTTA GATCGCTCCT GGCAAGCAGG CAAAACCTAT
AACTTTGGTC TTTACCCGGC GGGCGATGAG TGGCAACTGG CGCTCAGTGA CGGCGAAACC
GGCAAAAATT ACCTTTCCGA CGCTTTTAAA TTTGGCGGCG AGCAAAAACT GCAACTGAAA
GAAACGACCG CCCAGCCCGA AGGCGAACGC GCGAATCTAC GCGTGATTAC CCAGAATCGT
CAGGCGCTGA GTGACATTAC CGCCATTCTG CCGGATGGCA ACAAAGTGAT GATGAGCTCC
CTGCGCCAGT TTTCTGGCAC GCAGCCGCTC TACACACTCG ACGGTGACGG CACGTTGACG
AATAATCAGA GCGGCGTGAA ATATCGTCCG AATAACCAAA TTGGCTTTTA CCAGTCCATT
ACCGCCGACG GCAACTGGGG TGATGAAAAG CTAAGCCCCG GTTACACCGT GACCACCGGC
TGGAAAAACT TTACCCGCGT CTTTACCGAC GAAGGCATTC AGAAACCGTT CCTCGCCATT
TTCGTCTGGA CCGTGGTGTT CTCGCTGATC ACTGTCTTTT TAACGGTGGC GGTCGGCATG
GTTCTGGCAT GTCTGGTGCA GTGGGAAGCG TTGCGCGGCA AAGCGGTCTA TCGCGTCCTG
CTGATTCTGC CCTACGCGGT GCCATCGTTC ATTTCAATCT TGATTTTCAA AGGATTGTTT
AACCAGAGCT TCGGTGAAAT CAACATGATG TTGAGCGCGC TGTTTGGCGT GAAGCCCGCC
TGGTTCAGCG ATCCGACCAC CGCCCGCACG ATGCTGATTA TCGTCAATAC TTGGCTGGGT
TATCCGTACA TGATGATCCT CTGCATGGGC TTGCTGAAAG CGATTCCGGA CGATTTGTAT
GAAGCCTCAG CAATGGATGG CGCAGGTCCG TTCCAGAACT TCTTTAAGAT TACGCTACCG
CTGCTGATTA AACCGCTGAC GCCGCTGATG ATCGCCAGCT TCGCCTTTAA CTTTAACAAC
TTCGTGCTGA TTCAGCTGTT AACCAACGGC GGCCCGGATC GTCTTGGCAC GACCACGCCA
GCCGGTTATA CCGACCTGCT TGTTAACTAC ACCTACCGTA TCGCTTTTGA AGGCGGCGGG
GGTCAGGACT TCGGTCTGGC TGCAGCAATT GCCACGCTGA TCTTCCTGCT GGTGGGTGCG
CTGGCGATAG TGAACCTGAA AGCCACGCGA ATGAAGTTTG ATTAA
|
|---|
| Protein sequence | MDVIKKKHWW QSDALKWSVL GLLGLLVGYL VVLMYAQGEY LFAITTLILS SAGLYIFANR
KAYAWRYVYP GMAGMGLFVL FPLVCTIAIA FTNYSSTNQL TFERAQEVLL DRSWQAGKTY
NFGLYPAGDE WQLALSDGET GKNYLSDAFK FGGEQKLQLK ETTAQPEGER ANLRVITQNR
QALSDITAIL PDGNKVMMSS LRQFSGTQPL YTLDGDGTLT NNQSGVKYRP NNQIGFYQSI
TADGNWGDEK LSPGYTVTTG WKNFTRVFTD EGIQKPFLAI FVWTVVFSLI TVFLTVAVGM
VLACLVQWEA LRGKAVYRVL LILPYAVPSF ISILIFKGLF NQSFGEINMM LSALFGVKPA
WFSDPTTART MLIIVNTWLG YPYMMILCMG LLKAIPDDLY EASAMDGAGP FQNFFKITLP
LLIKPLTPLM IASFAFNFNN FVLIQLLTNG GPDRLGTTTP AGYTDLLVNY TYRIAFEGGG
GQDFGLAAAI ATLIFLLVGA LAIVNLKATR MKFD
|
|---|
| |