Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcHS_A4271 |
Symbol | xylE |
ID | 5594932 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli HS |
Kingdom | Bacteria |
Replicon accession | NC_009800 |
Strand | - |
Start bp | 4272523 |
End bp | 4273998 |
Gene Length | 1476 bp |
Protein Length | 491 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640923373 |
Product | D-xylose transporter XylE |
Protein accession | YP_001460818 |
Protein GI | 157163500 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR00879] MFS transporter, sugar porter (SP) family |
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Plasmid Coverage information |
Num covering plasmid clones | 59 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATACCC AGTATAATTC CAGTTATATA TTTTCGATTA CCTTAGTCGC TACATTAGGT GGTTTATTAT TTGGCTACGA CACCGCCGTT ATTTCCGGTA CTGTTGAGTC ACTCAATACC GTCTTTGTTG CTCCACAAAA CTTAAGTGAA TCCGCTGCCA ACTCCCTGTT AGGATTTTGC GTAGCCAGCG CTCTGATTGG TTGCATCATC GGCGGTGCCC TCGGTGGTTA TTGCAGTAAC CGCTTCGGCC GTCGTGATTC ACTTAAGATT GCTGCTGTCC TGTTTTTTAT TTCTGGTGTA GGTTCTGCCT GGCCAGAACT TGGTTTTACC TCTATAAACC CGGACAACAC AGTACCTATT TATCTGGCAG GTTATGTCCC GGAATTTGTT ATTTATCGTA TTATTGGCGG TATTGGCGTT GGTTTAGCCT CAATGCTTTC ACCAATGTAT ATTGCGGAAC TGGCTCCAGC TCATATTCGC GGAAAACTGG TTTCATTTAA CCAGTTTGCG ATTATTTTCG GGCAACTTTT AGTTTACTGC GTAAACTATT TTATTGCCCG TTCCGGTGAT GCCAGCTGGC TGAATACTGA CGGCTGGCGT TATATGTTTG CCTCGGAATG TATCCCTGCA CTGCTGTTCT TAATGCTGCT GTATACCGTG CCAGAAAGTC CTCGCTGGCT GATGTCACGC GGCAAGCAAG AACAGGCGGA AAGTATCCTG CGCAAAATTA TGGGCAACAC GCTTGCAACT CAGGCAGTAC AGGAAATTAA ACACTCCCTG GATCATGGCC GCAAAACCGG TGGTCGTCTG CTGATGTTTG GCGTGGGCGT GATTGTAATC GGCGTTATGC TCTCCATCTT CCAGCAATTT GTCGGCATCA ATGTGGTGTT GTACTACGCG CCGGAAGTGT TCAAAACGCT GGGGGCCAGC ACGGATATCG CGCTGTTGCA GACCATTATT GTCGGAGTTA TCAACCTCAC CTTTACCGTA CTGGCAATTA TGACGGTGGA TAAATTTGGT CGTAAGCCAC TGCAAATTAT CGGCGCACTC GGAATGGCAA TCGGTATGTT TAGCCTCGGT ACCGCGTTTT ACACTCAGGC ATCGGGTATT GTGGCGCTAC TGTCGATGCT GTTCTATGTT GCCGCCTTTG CCATGTCCTG GGGTCCGGTA TGCTGGGTAC TGCTGTCGGA AATCTTCCCG AATGCTATTC GTGGTAAAGC GCTGGCAATC GCGGTGGCGG CCCAGTGGCT GGCGAACTAC TTCGTCTCCT GGACCTTCCC GATGATGGAC AAAAACTCCT GGCTGGTGGC CCATTTCCAC AACGGTTTCT CCTACTGGAT TTACGGGTGT ATGGGCGTTC TGGCAGCACT GTTTATGTGG AAATTTGTCC CGGAAACCAA AGGTAAAACC CTTGAGGAGC TGGAAGCCCT CTGGGAACCG GAAACGAAGA AAACACAACA AACTGCTACG CTGTAA
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Protein sequence | MNTQYNSSYI FSITLVATLG GLLFGYDTAV ISGTVESLNT VFVAPQNLSE SAANSLLGFC VASALIGCII GGALGGYCSN RFGRRDSLKI AAVLFFISGV GSAWPELGFT SINPDNTVPI YLAGYVPEFV IYRIIGGIGV GLASMLSPMY IAELAPAHIR GKLVSFNQFA IIFGQLLVYC VNYFIARSGD ASWLNTDGWR YMFASECIPA LLFLMLLYTV PESPRWLMSR GKQEQAESIL RKIMGNTLAT QAVQEIKHSL DHGRKTGGRL LMFGVGVIVI GVMLSIFQQF VGINVVLYYA PEVFKTLGAS TDIALLQTII VGVINLTFTV LAIMTVDKFG RKPLQIIGAL GMAIGMFSLG TAFYTQASGI VALLSMLFYV AAFAMSWGPV CWVLLSEIFP NAIRGKALAI AVAAQWLANY FVSWTFPMMD KNSWLVAHFH NGFSYWIYGC MGVLAALFMW KFVPETKGKT LEELEALWEP ETKKTQQTAT L
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