| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A4195 |
|---|
| Symbol | oxyR |
|---|
| ID | 5594504 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli HS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009800 |
|---|
| Strand | + |
|---|
| Start bp | 4188156 |
|---|
| End bp | 4189073 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 640923298 |
|---|
| Product | DNA-binding transcriptional regulator OxyR |
|---|
| Protein accession | YP_001460756 |
|---|
| Protein GI | 157163438 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 50 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATATTC GTGATCTTGA GTACCTGGTG GCATTGGCTG AACACCGCCA TTTTCGGCGT
GCGGCAGATT CCTGCCACGT TAGCCAGCCG ACGCTTAGCG GGCAAATTCG TAAGCTGGAA
GATGAGTTGG GCGTGATGTT GCTGGAGCGG ACCAGCCGTA AAGTGTTGTT CACCCAGGCG
GGAATGCTGC TGGTGGATCA GGCGCGTACC GTGCTGCGTG AGGTGAAAGT CCTTAAAGAG
ATGGCAAGCC AGCAGGGCGA GACGATGTCC GGACCGCTGC ATATTGGTTT GATTCCCACG
GTTGGACCGT ACCTGCTACC GCATATTATC CCGATGCTGC ACCAGACCTT TCCAAAGCTG
GAAATGTATC TGCATGAAGC ACAGACCCAC CAGTTACTGG CGCAACTGGA CAGTGGCAAA
CTCGATTGCG TGATCCTCGC GCTGGTGAAA GAGAGCGAAG CATTCATTGA AGTGCCGTTG
TTTGATGAGC CAATGTTGCT GGCTATCTAT GAAGATCACC CGTGGGCGAA CCGCGAATGC
GTACCGATGG CCGATCTGGC AGGGGAAAAA CTGCTGATGC TGGAAGATGG TCACTGTTTG
CGCGATCAGG CAATGGGTTT CTGCTTTGAA GCCGGGGCGG ATGAAGATAC ACACTTCCGC
GCGACCAGCC TGGAGACACT GCGTAACATG GTGGCGGCAG GTAGCGGGAT CACTTTACTG
CCTGCGCTGG CTGTGCCGCC GGAGCGCAAA CGCGATGGGG TTGTTTATTT GCCGTGTATT
AAGCCGGAAC CTCGCCGCAC GATTGGCCTG GTTTATCGTC CTGGCTCACC GCTGCGCAGC
CGCTATGAGC AGCTGGCAGA GGCCATCCGC GCAAGAATGG ATGGCCATTT CGATAAAGTG
TTAAAACAGG CGGTTTAA
|
|---|
| Protein sequence | MNIRDLEYLV ALAEHRHFRR AADSCHVSQP TLSGQIRKLE DELGVMLLER TSRKVLFTQA
GMLLVDQART VLREVKVLKE MASQQGETMS GPLHIGLIPT VGPYLLPHII PMLHQTFPKL
EMYLHEAQTH QLLAQLDSGK LDCVILALVK ESEAFIEVPL FDEPMLLAIY EDHPWANREC
VPMADLAGEK LLMLEDGHCL RDQAMGFCFE AGADEDTHFR ATSLETLRNM VAAGSGITLL
PALAVPPERK RDGVVYLPCI KPEPRRTIGL VYRPGSPLRS RYEQLAEAIR ARMDGHFDKV
LKQAV
|
|---|
| |