Gene EcHS_A4177 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A4177 
Symbol 
ID5594266 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp4164741 
End bp4165646 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content54% 
IMG OID640923279 
Productputative transporter 
Protein accessionYP_001460738 
Protein GI157163420 
COG category[R] General function prediction only 
COG ID[COG2962] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones66 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGCCG CAGGAAAGAG CAACCCACTG GCAATCAGTG GCCTGGTTGT GCTCACACTT 
ATCTGGAGTT ATAGCTGGAT TTTCATGAAG CAAGTCACCA GTTACATCGG TGCCTTCGAC
TTTACCGCCT TACGCTGCAT TTTCGGCGCT CTCGTTTTAT TCATCGTCCT TTTATTACGT
GGTCGCGGAA TGCGCCCGAC ACCGTTTAAA TACACCTTAG CCATTGCCCT GTTACAAACC
TGCGGGATGG TTGGTCTGGC GCAGTGGGCG TTGGTCAGCG GAGGTGCGGG GAAGGTGGCG
ATCCTGAGCT ATACCATGCC GTTCTGGGTG GTGATTTTCG CCGCGTTGTT TCTCGGTGAA
CGCCTGCGAC GTGGGCAATA TTTCGCGATT CTGATTGCCG CTTTCGGCTT ATTTTTGGTG
TTGCAGCCGT GGCAACTCGA TTTCTCTTCG ATGAAAAGTG CCATGCTGGC AATCCTCTCC
GGCGTCAGTT GGGGGGCGAG CGCGATTGTT GCTAAACGTC TGTATGCCCG TCATCCGCGC
GTGGATTTAT TGTCGTTAAC ATCCTGGCAG ATGCTGTATG CGGCGCTGGT GATGAGTGTG
GTCGCTTTAC TGGTGCCGCA ACGTGAAATT GACTGGCAGC CCACCGTGTT CTGGGCGCTG
GCCTACAGTG CGATTCTGGC GACGGCACTG GCGTGGAGCT TATGGTTGTT TGTATTGAAA
AACTTGCCTG CCAGTATTGC CAGCTTAAGC ACACTGGCCG TTCCCGTTTG CGGCGTACTC
TTTTCCTGGT GGCTGCTCGG CGAGAATCCG GGGGCCGTTG AAGGTAGCGG TATTGTGCTG
ATTGTGCTGG CACTGGCGCT GGTGAGCCGT AAGAAAAAAG AAGCCGTCAG TGTAAAAAGG
ATCTGA
 
Protein sequence
MSAAGKSNPL AISGLVVLTL IWSYSWIFMK QVTSYIGAFD FTALRCIFGA LVLFIVLLLR 
GRGMRPTPFK YTLAIALLQT CGMVGLAQWA LVSGGAGKVA ILSYTMPFWV VIFAALFLGE
RLRRGQYFAI LIAAFGLFLV LQPWQLDFSS MKSAMLAILS GVSWGASAIV AKRLYARHPR
VDLLSLTSWQ MLYAALVMSV VALLVPQREI DWQPTVFWAL AYSAILATAL AWSLWLFVLK
NLPASIASLS TLAVPVCGVL FSWWLLGENP GAVEGSGIVL IVLALALVSR KKKEAVSVKR
I