Gene EcHS_A4163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A4163 
SymbolhslU 
ID5595025 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp4148425 
End bp4149756 
Gene Length1332 bp 
Protein Length443 aa 
Translation table11 
GC content53% 
IMG OID640923265 
ProductATP-dependent protease ATP-binding subunit HslU 
Protein accessionYP_001460724 
Protein GI157163406 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1220] ATP-dependent protease HslVU (ClpYQ), ATPase subunit 
TIGRFAM ID[TIGR00390] ATP-dependent protease HslVU, ATPase subunit 


Plasmid Coverage information

Num covering plasmid clones66 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGAAA TGACCCCACG CGAAATCGTC AGCGAACTGG ATAAGCACAT CATCGGCCAG 
GACAACGCCA AGCGTTCTGT GGCGATTGCT CTGCGTAACC GCTGGCGTCG CATGCAGCTC
AACGAAGAGC TGCGCCATGA AGTGACCCCG AAAAATATCC TGATGATCGG CCCGACCGGT
GTCGGTAAAA CTGAAATCGC CCGTCGTCTG GCTAAGCTGG CGAATGCGCC GTTCATCAAA
GTTGAAGCGA CCAAATTCAC CGAAGTGGGC TACGTCGGTA AGGAAGTGGA TTCTATTATT
CGCGATCTGA CCGATGCCGC CGTGAAAATG GTACGCGTCC AGGCTATCGA GAAAAACCGT
TATCGCGCTG AAGAACTGGC AGAAGAACGT ATTCTCGACG TGCTGATCCC ACCTGCTAAA
AACAACTGGG GACAGACCGA ACAGCAGCAG GAACCGTCCG CTGCTCGTCA GGCATTCCGC
AAAAAACTGC GTGAAGGCCA GCTTGATGAC AAAGAAATCG AGATCGATCT TGCCGCAGCA
CCGATGGGCG TTGAAATTAT GGCTCCTCCG GGCATGGAAG AGATGACCAG CCAGCTGCAG
TCCATGTTCC AGAACCTGGG CGGCCAGAAG CAAAAAGCGC GTAAGCTGAA AATCAAAGAC
GCCATGAAGC TGCTGATTGA AGAAGAAGCG GCGAAACTGG TGAACCCGGA AGAGCTGAAG
CAAGACGCTA TCGACGCTGT TGAGCAGCAC GGGATCGTGT TTATCGACGA AATCGACAAA
ATCTGTAAGC GCGGCGAGTC TTCCGGTCCG GATGTTTCTC GTGAAGGCGT TCAGCGTGAC
CTGCTGCCGC TGGTAGAAGG TTGCACCGTT TCCACCAAAC ACGGGATGGT CAAAACTGAC
CACATTCTGT TTATCGCTTC TGGCGCGTTC CAGATTGCGA AACCGTCTGA CCTGATCCCG
GAACTGCAAG GTCGTCTGCC AATCCGCGTT GAACTGCAGG CGCTGACCAC CAGCGACTTC
GAGCGTATTC TGACCGAGCC GAATGCCTCT ATCACCGTGC AGTACAAAGC ACTGATGGCG
ACTGAAGGCG TAAATATCGA GTTTACCGAC TCCGGTATTA AACGCATCGC GGAAGCGGCA
TGGCAGGTGA ACGAATCTAC CGAAAACATC GGTGCTCGTC GTTTACACAC TGTTCTGGAG
CGTTTAATGG AAGAGATTTC CTACGACGCC AGCGATTTAA GCGGTCAAAA TATCACTATT
GACGCAGATT ATGTGAGCAA ACATCTGGAT GCGTTGGTGG CAGATGAAGA TCTGAGCCGT
TTTATCCTAT AA
 
Protein sequence
MSEMTPREIV SELDKHIIGQ DNAKRSVAIA LRNRWRRMQL NEELRHEVTP KNILMIGPTG 
VGKTEIARRL AKLANAPFIK VEATKFTEVG YVGKEVDSII RDLTDAAVKM VRVQAIEKNR
YRAEELAEER ILDVLIPPAK NNWGQTEQQQ EPSAARQAFR KKLREGQLDD KEIEIDLAAA
PMGVEIMAPP GMEEMTSQLQ SMFQNLGGQK QKARKLKIKD AMKLLIEEEA AKLVNPEELK
QDAIDAVEQH GIVFIDEIDK ICKRGESSGP DVSREGVQRD LLPLVEGCTV STKHGMVKTD
HILFIASGAF QIAKPSDLIP ELQGRLPIRV ELQALTTSDF ERILTEPNAS ITVQYKALMA
TEGVNIEFTD SGIKRIAEAA WQVNESTENI GARRLHTVLE RLMEEISYDA SDLSGQNITI
DADYVSKHLD ALVADEDLSR FIL