| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A4133 |
|---|
| Symbol | rhaB |
|---|
| ID | 5592696 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli HS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009800 |
|---|
| Strand | - |
|---|
| Start bp | 4123988 |
|---|
| End bp | 4125457 |
|---|
| Gene Length | 1470 bp |
|---|
| Protein Length | 489 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 640923235 |
|---|
| Product | rhamnulokinase |
|---|
| Protein accession | YP_001460694 |
|---|
| Protein GI | 157163376 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1070] Sugar (pentulose and hexulose) kinases |
|---|
| TIGRFAM ID | [TIGR02627] rhamnulokinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 50 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCTTTC GCAATTGTGT CGCCGTCGAT CTCGGCGCAT CCAGTGGGCG CGTGATGCTG
GCGCGTTACG AGCGTGAATG CCGCAGCCTG ACGCTGCGCG AAATCCATCG TTTTAACAAT
GGGCTGCATA GTCAGAACGG CTATGTCACC TGGGATGTGG ATAGCCTTGA AAGTGCCATT
CGCCTTGGAT TAAACAAGGT GTGCGAGGAA GGGATTCGTA TCGATAGCAT TGGGATTGAT
ACCTGGGGCG TGGACTTTGT GCTGCTCGAC CAACAGGGTC AGCGTGTGGG CCTGCCCGTT
GCTTATCGCG ATAGCCGCAC CAATGGCCTA ATGGCGCAGG CACAACAACA ACTCGGCAAA
CGCGATATTT ATCAACGTAG CGGCATCCAG TTTCTGCCCT TCAATACGCT TTATCAGTTG
CGTGCGCTGA CGGAGCAACA ACCTGAACTT ATTCCACACA TTGCTCACGC TCTGCTGATG
CCGGATTACT TCAGTTATCG CCTGACCGGC AAGATGAACT GGGAATATAC CAACGCCACG
ACCACGCAAC TGGTCAATAT CAATAGCGAC GACTGGGACG AGTCGCTACT GGCGTGGAGC
GGGGCCAACA AAGCCTGGTT TGGTCGCCCG ACGCATCCGG GTAATGTCAT AGGTCACTGG
ATTTGCCCGC AGGGTAATGA GATTCCAGTG GTCGCCGTTG CCAGCCATGA TACCGCCAGC
GCGGTTATCG CCTCGCCGTT AAACGGCTCA CGTGCTGCTT ATCTCTCTTC TGGCACCTGG
TCATTGATGG GCTTCGAAAG CCAGACGCCA TTTACCAATG ACACGGCACT GGCAGCCAAC
ATCACCAATG AAGGCGGGGC GGAAGGTCGC TATCGGGTGC TGAAAAATAT TATGGGCTTA
TGGCTGCTTC AGCGAGTGCT TCAGGAGCAG CAAATCAACG ATCTTCCGGC GCTTATCTCC
GCGACACAGG CACTTCCGGC TTGCCGCTTC ATTATCAATC CCAATGACGA TCGCTTTATT
AATCCTGAGA CGATGTGCAG CGAAATTCAG GCTGCGTGTC GGGAAACGGC GCAACCGATC
CCGGAAAGTG ATGCTGAACT GGCGCGCTGC ATTTTCGACA GTCTGGCGCT GCTGTATGCC
GATGTGTTGC ATGAGCTGGC GCAGCTGCGC GGTGAAGATT TCTCGCAACT GTATATTGTC
GGCGGAGGCT GCCAGAACAC GCTGCTCAAC CAGCTATGCG CCGATGCCTG CGGTATTCGG
GTGATCGCCG GGCCTGTTGA AGCCTCGACG CTCGGCAATA TCGGCATCCA GTTAATGACG
CTGGATGAAC TCAACAATGT GGATGATTTC CGTCAGGTCG TCAGCACCAC CGCGAATCTG
ACCACCTTTA CCCCTAATCC TGACAGTGAA ATTGCCCACT ATGTGGCGCG GATTCACTCT
ACACGACAGA CAAAGGAGCT TTGCGCATGA
|
|---|
| Protein sequence | MTFRNCVAVD LGASSGRVML ARYERECRSL TLREIHRFNN GLHSQNGYVT WDVDSLESAI
RLGLNKVCEE GIRIDSIGID TWGVDFVLLD QQGQRVGLPV AYRDSRTNGL MAQAQQQLGK
RDIYQRSGIQ FLPFNTLYQL RALTEQQPEL IPHIAHALLM PDYFSYRLTG KMNWEYTNAT
TTQLVNINSD DWDESLLAWS GANKAWFGRP THPGNVIGHW ICPQGNEIPV VAVASHDTAS
AVIASPLNGS RAAYLSSGTW SLMGFESQTP FTNDTALAAN ITNEGGAEGR YRVLKNIMGL
WLLQRVLQEQ QINDLPALIS ATQALPACRF IINPNDDRFI NPETMCSEIQ AACRETAQPI
PESDAELARC IFDSLALLYA DVLHELAQLR GEDFSQLYIV GGGCQNTLLN QLCADACGIR
VIAGPVEAST LGNIGIQLMT LDELNNVDDF RQVVSTTANL TTFTPNPDSE IAHYVARIHS
TRQTKELCA
|
|---|
| |