Gene EcHS_A4128 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A4128 
Symbol 
ID5593415 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp4120570 
End bp4121016 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content50% 
IMG OID640923231 
Productputative fructose-like phosphotransferase system subunit EIIA 
Protein accessionYP_001460690 
Protein GI157163372 
COG category[G] Carbohydrate transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG1762] Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) 
TIGRFAM ID[TIGR00848] PTS system, fructose subfamily, IIA component 


Plasmid Coverage information

Num covering plasmid clones65 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGCTC TTACTGCAAG CTGTATTGAC CTGAATATTC AGGGCAATGG CGCTTATTCC 
GTTCTGAAGC AGTTGGCGAC AATAGCGTTA CAAAACGGTT TTATCACCGA CTCACACCAG
TTCCTGCAAA CCCTGCTGCT GCGCGAAAAA ATGCACTCTA CTGAATTTGG TTCCGGTGTC
GCCGTGCCGC ACGGTAAAAG CGCCTGCGTT AAACAACCGT TCGTATTATT CGCCCGCAAA
GCGCAGGCTA TTGACTGGAA AGCCAGCGAT GGCGAAGACG TGAATTGCTG GATCTGCCTC
GGCGTGCCGC AAAGCGGCGA AGAGGATCAG GTCAAAATCA TCGGCACACT GTGTCGCAAA
ATTATTCACA AGGAATTTAT TCATCAACTG CAACAGGGCG ATACCGACCA GGTGCTTGCC
TTGTTAAATC AAACCCTCAG CTCATAA
 
Protein sequence
MAALTASCID LNIQGNGAYS VLKQLATIAL QNGFITDSHQ FLQTLLLREK MHSTEFGSGV 
AVPHGKSACV KQPFVLFARK AQAIDWKASD GEDVNCWICL GVPQSGEEDQ VKIIGTLCRK
IIHKEFIHQL QQGDTDQVLA LLNQTLSS