Gene EcHS_A4102 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A4102 
Symbol 
ID5592772 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp4093762 
End bp4094550 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content50% 
IMG OID640923206 
ProductDeoR family transcriptional regulator 
Protein accessionYP_001460665 
Protein GI157163347 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG1349] Transcriptional regulators of sugar metabolism 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones54 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTATCA TCGAAGTGAC AGGTAATCCA CGCCATGACC AACTCGTTCA TCTAATCGCA 
GAACGCGGTT ATATGAATAT TGAAGAACTG GCACAACTGC TGGATGTTTC AACGCAAACC
GTGCGCCGGG ATATCCGAAA ACTCAGTGAG CAGGGCTTGA TCACCCGTCA TCATGGAGGG
GCCGGGCGCG TCTCCAGCGT CATGAATACC GCTTTTGAGC AACGGGAACT TTCGCTCACC
GCCGAGAAAC GGGCGATCGC TGAGGCAGTC GCCGATTACC TTCCCGAACG CTGTACCGTC
TTTATCACCA TCGGTACAAC CGTAGAAGCC GTTGCCAGGG CATTACTCAA CCGGCGTGAT
TTACGCATTA TCACTAACAG CCTACGTGTG GCACAGATTC TTTATAAGAA TCAGGATATT
GAAGTGATGG TGCCGGGAGG CACTTTACGC GCTCATAACG GCGGGATTAT CGGCCCAGGA
GCCGTGGATT TTATTGAAGG CTTCCGCGCA GATTATTTAA TCACCAGTAT AGGTGCCATT
GAACATGACG GCACCCTACT GGAATTTGAT GTAAATGAAG CGTTAGTCGC GAGAACGATG
ATTAAACATG CGCGGAATAC ATTGTTAGTG GCCGATCATA CGAAGTTTGC CGCGTCTGCT
GCCGTTTCAA TTGGCAATGC ACGGAATGTC AGGGCTTTTT TTACAGATGC CCCGCCTCCC
AATTCTTTCT GCCAGTTGTT AAGTGAAGAG AATGTTGAAC TGGTGGTTGC CGAGCAGGAA
GTTTCCTGA
 
Protein sequence
MSIIEVTGNP RHDQLVHLIA ERGYMNIEEL AQLLDVSTQT VRRDIRKLSE QGLITRHHGG 
AGRVSSVMNT AFEQRELSLT AEKRAIAEAV ADYLPERCTV FITIGTTVEA VARALLNRRD
LRIITNSLRV AQILYKNQDI EVMVPGGTLR AHNGGIIGPG AVDFIEGFRA DYLITSIGAI
EHDGTLLEFD VNEALVARTM IKHARNTLLV ADHTKFAASA AVSIGNARNV RAFFTDAPPP
NSFCQLLSEE NVELVVAEQE VS