Gene EcHS_A4064 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A4064 
SymbolrfaH 
ID5594372 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand- 
Start bp4054691 
End bp4055179 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content49% 
IMG OID640923168 
Producttranscriptional activator RfaH 
Protein accessionYP_001460634 
Protein GI157163316 
COG category[K] Transcription 
COG ID[COG0250] Transcription antiterminator 
TIGRFAM ID[TIGR01955] transcriptional activator RfaH 


Plasmid Coverage information

Num covering plasmid clones55 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAATCCT GGTATTTACT GTACTGCAAG CGCGGGCAAC TTCAACGTGC CCAGGAACAC 
CTCGAAAGAC AGGCTGTGAA TTGCCTGGCA CCGATGATCA CCCTGGAAAA AATCGTGCGT 
GGAAAACGTA CTGCAGTCAG TGAGCCATTG TTCCCCAACT ACCTGTTTGT GGAATTTGAT 
CCAGAAGTGA TTCATACCAC GACTATCAAC GCGACCCGCG GTGTCAGCCA CTTCGTGCGC 
TTTGGCGCGT CGCCAGCGAT AGTCCCATCG GCGGTTATTC ATCAGCTATC GGTATATAAA 
CCGAAAGACA TTGTCGATCC GGCAACCCCT TATCCGGGTG ATAAGGTGAT TATTACCGAA 
GGCGCGTTCG AAGGCTTTCA GGCCATTTTC ACCGAACCCG ATGGTGAGGC TCGCTCCATG 
CTATTGCTTA ATCTTATTAA TAAAGAGATT AAGCACAGTG TGAAGAATAC CGAGTTCCGC 
AAACTCTAA
 
Protein sequence
MQSWYLLYCK RGQLQRAQEH LERQAVNCLA PMITLEKIVR GKRTAVSEPL FPNYLFVEFD 
PEVIHTTTIN ATRGVSHFVR FGASPAIVPS AVIHQLSVYK PKDIVDPATP YPGDKVIITE 
GAFEGFQAIF TEPDGEARSM LLLNLINKEI KHSVKNTEFR KL