Gene EcHS_A4062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A4062 
SymboltatC 
ID5592677 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp4053094 
End bp4053870 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content52% 
IMG OID640923166 
Producttwin-arginine protein translocation system subunit TatC 
Protein accessionYP_001460632 
Protein GI157163314 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0805] Sec-independent protein secretion pathway component TatC 
TIGRFAM ID[TIGR00945] Twin arginine targeting (Tat) protein translocase TatC 


Plasmid Coverage information

Num covering plasmid clones57 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGTAG AAGATACTCA ACCGCTTATC ACGCATCTGA TTGAGCTGCG TAAGCGTCTG 
CTGAACTGCA TTATCGCGGT GATCGTGATA TTCCTGTGTC TGGTCTATTT CGCCAATGAC
ATCTATCACC TGGTATCCGC GCCATTGATC AAGCAGTTGC CGCAAGGTTC AACGATGATC
GCCACCGACG TGGCCTCGCC GTTCTTTACG CCGATCAAGC TGACCTTTAT GGTGTCGCTG
ATTCTGTCAG CGCCGGTGAT TCTCTATCAG GTGTGGGCAT TTATCGCCCC AGCGCTGTAT
AAGCATGAAC GTCGCCTGGT GGTGCCGCTG CTGGTTTCCA GCTCTCTGCT GTTTTATATC
GGCATGGCAT TCGCCTACTT TGTGGTCTTT CCGCTGGCAT TTGGCTTCCT TGCCAATACC
GCGCCGGAAG GGGTGCAGGT ATCCACCGAC ATCGCCAGCT ATTTAAGCTT CGTTATGGCG
CTGTTTATGG CGTTTGGTGT CTCCTTTGAA GTGCCGGTAG CAATTGTGCT GCTGTGCTGG
ATGGGGATTA CCTCGCCAGA AGACTTACGC AAAAAACGCC CGTATGTGCT GGTTGGTGCA
TTCGTTGTCG GGATGTTGCT GACGCCGCCG GATGTCTTCT CGCAAACGCT GTTGGCGATC
CCGATGTACT GTCTGTTTGA AATCGGTGTC TTCTTCTCAC GCTTTTACGT TGGTAAAGGG
CGAAATCGGG AAGAGGAAAA CGACGCTGAA GCAGAAAGCG AAAAAACTGA AGAATAA
 
Protein sequence
MSVEDTQPLI THLIELRKRL LNCIIAVIVI FLCLVYFAND IYHLVSAPLI KQLPQGSTMI 
ATDVASPFFT PIKLTFMVSL ILSAPVILYQ VWAFIAPALY KHERRLVVPL LVSSSLLFYI
GMAFAYFVVF PLAFGFLANT APEGVQVSTD IASYLSFVMA LFMAFGVSFE VPVAIVLLCW
MGITSPEDLR KKRPYVLVGA FVVGMLLTPP DVFSQTLLAI PMYCLFEIGV FFSRFYVGKG
RNREEENDAE AESEKTEE