Gene EcHS_A4040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A4040 
Symbol 
ID5591844 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp4030769 
End bp4031533 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content48% 
IMG OID640923143 
Producthypothetical protein 
Protein accessionYP_001460609 
Protein GI157163291 
COG category[S] Function unknown 
COG ID[COG3698] Predicted periplasmic protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones49 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGCATC GGCTACTCAT TGGTAAAGGA ATGATCACCT TGAATCTCAA ACGGATTTTT 
CTCGCCCTCA CCTTACTTCC CTTGTTTGCT GTTGCCGCTG ATGATTGCGC ACTCTCAGAT
CCGACGCTGA CCGTACAGGC GTATACCGTT AATCCTCAAA CAGAGCGGGT GAAAATGTAC
TGGCAAAAAG CCAATGGCGA AGCGTGGGGA ACGTTACATG CTCTGCTGGC GGATATGAAT
AGTCAGGGTC AGGTGCAGAT GGCGATGAAC GGCGGCATCT ATGATGAAAG CTATGCGCCG
CTCGGTTTGT ACATCGAAAA CGGTCAGCAG AAGGTGGCGT TAAATCTCGC TTCAGGTGAA
GGGAATTTCT TTATCCGTCC TGGCGGCGTG TTTTATGTCG CGGGAGATAA AGTCGGCATC
GTTCGTCTGG ATGCCTTCAA AACCAGTAAA GAGATTCAGT TTGCGGTGCA GTCAGGGCCA
ATGTTGATGG AAAACGGTGT AATTAATCCG CGTATTCATC CCAACGTCGC CTCAAGCAAA
ATTCGTAACG GTGTTGGGAT TAATAAACAT GGGAACGCCG TGTTTTTGTT GAGCCAGCAG
GCAACAAATT TTTATGATTT TGCCTGTTAT GCCAAAGCGA AACTGAACGT TGAGCAGCTG
CTTTATCTTG ATGGCACGAT TTCACATATG TATATGAAAG GCGGGGCAAT CCCGTGGCAA
CGCTATCCTT TTGTCACCAT GATTTCCGTC GAGCGGAAAG GTTAA
 
Protein sequence
MAHRLLIGKG MITLNLKRIF LALTLLPLFA VAADDCALSD PTLTVQAYTV NPQTERVKMY 
WQKANGEAWG TLHALLADMN SQGQVQMAMN GGIYDESYAP LGLYIENGQQ KVALNLASGE
GNFFIRPGGV FYVAGDKVGI VRLDAFKTSK EIQFAVQSGP MLMENGVINP RIHPNVASSK
IRNGVGINKH GNAVFLLSQQ ATNFYDFACY AKAKLNVEQL LYLDGTISHM YMKGGAIPWQ
RYPFVTMISV ERKG