| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A4025 |
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| Symbol | hemC |
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| ID | 5592075 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli HS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009800 |
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| Strand | - |
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| Start bp | 4016663 |
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| End bp | 4017625 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640923130 |
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| Product | porphobilinogen deaminase |
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| Protein accession | YP_001460596 |
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| Protein GI | 157163278 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0181] Porphobilinogen deaminase |
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| TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 0.105851 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAATGA CGGTAACAAG CATGTTAGAC AATGTTTTAA GAATTGCCAC ACGCCAAAGC
CCACTTGCAC TCTGGCAGGC ACACTATGTC AAAGACAAGT TGATGGCGAG CCATCCGGGC
CTGGTCGTTG AACTGGTACC GATGGTGACG CGCGGCGATG TGATTCTTGA TACGCCGCTG
GCGAAAGTAG GCGGAAAAGG CTTATTTGTA AAAGAGCTGG AAGTCGCGCT CCTCGAAAAT
CGCGCCGATA TCGCCGTACA TTCAATGAAA GATGTGCCGG TTGAATTCCC GCAAGGTCTG
GGACTGGTCA CTATTTGTGA GCGTGAAGAT CCTCGCGATG CCTTTGTGTC CAATAACTAT
GACAGTCTGG ATGCGTTACC GGCAGGCAGT ATCGTCGGGA CGTCCAGTTT ACGTCGCCAG
TGCCAACTGG CTGAACGCCG TCCGGATCTG ATTATCCGCT CCCTGCGCGG CAACGTCGGC
ACTCGCCTGA GCAAACTGGA TAACGGCGAA TACGATGCCA TCATTCTTGC CGTAGCCGGA
CTAAAACGTT TAGGTCTGGA GTCACGTATT CGCGCCGCGT TGCCACCCGA GATTTCTCTT
CCGGCGGTAG GACAAGGTGC GGTGGGTATT GAATGCCGCC TTGATGATTC ACGCACTCGC
GAGCTGCTTG CCGCGCTGAA TCACCACGAA ACTGCACTGC GCGTTACCGC AGAACGCGCC
ATGAATACCC GTCTCGAAGG CGGATGTCAG GTGCCAATTG GTAGCTACGC CGAGCTTATT
GATGGCGAAA TCTGGCTGCG TGCGCTGGTC GGCGCGCCGG ACGGTTCGCA GATTATTCGC
GGTGAACGCC GCGGTGCGCC GCAAGATGCC GAACAAATGG GGATTTCGCT GGCAGAAGAG
CTACTGAATA ACGGCGCGCG CGAGATCCTC GCTGAAGTCT ATAACGGAGA CGCCCCGGCA
TGA
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| Protein sequence | MIMTVTSMLD NVLRIATRQS PLALWQAHYV KDKLMASHPG LVVELVPMVT RGDVILDTPL
AKVGGKGLFV KELEVALLEN RADIAVHSMK DVPVEFPQGL GLVTICERED PRDAFVSNNY
DSLDALPAGS IVGTSSLRRQ CQLAERRPDL IIRSLRGNVG TRLSKLDNGE YDAIILAVAG
LKRLGLESRI RAALPPEISL PAVGQGAVGI ECRLDDSRTR ELLAALNHHE TALRVTAERA
MNTRLEGGCQ VPIGSYAELI DGEIWLRALV GAPDGSQIIR GERRGAPQDA EQMGISLAEE
LLNNGAREIL AEVYNGDAPA
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