Gene EcHS_A4024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A4024 
SymbolhemD 
ID5592074 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp4015926 
End bp4016666 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content53% 
IMG OID640923129 
Producturoporphyrinogen-III synthase 
Protein accessionYP_001460595 
Protein GI157163277 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1587] Uroporphyrinogen-III synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.00563247 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTATCC TGGTCACCCG CCCGTCTCCC GCTGGAGAAG AGTTAGTGAG CCGTCTGCGC 
ACACTGGGGC AGGTGGCCTG GCATTTTCCG CTGATTGAGT TTTCTCCGGG TCGACAATTA
CCGCAACTTG CTGATCAACT GGCAGCGCTG GGGGAGAGCG ATCTGTTGTT TGCCCTCTCG
CAACACGCGG TTGCTTTTGC CCAATCACAG CTACATCAGC AAGATCGTAA ATGGCCCCGA
CTACCTAATT ATTTCGCCAT TGGACGCACC ACCGCACTGG CACTACATAC CGTAAGCGGA
CAGAAGATTC TCTACCCGCA GGATCGGGAA ATCAGCGAAG TCTTGCTACA ATTACCTGAA
TTACAAAATA TTGCGGGCAA ACGTGCGCTG ATATTACGTG GCAATGGCGG TCGTGAGCTA
ATTGGGGATA CCCTGACGGC GCGCGGTGCT GAGGTCACTT TTTGTGAATG TTATCAACGA
TGCGCAATCC ATTACGATGG TGCCGAAGAA GCGATGCGCT GGCAATCCCG CGAGGTGACG
ACGGTCGTTG TTACCAGCGG TGAAATGTTG CAGCAACTCT GGTCGCTGAT CCCACAATGG
TATCGTGAGC ACTGGTTACT ACACTGTCGA CTATTGGTCG TCAGTGAGCG TTTGGCGAAA
CTCGCCCGGG AACTGGGCTG GCAAGACATT AAGGTCGCCG ATAACGCTGA CAACGATGCG
CTTTTACGGG CATTACAATA A
 
Protein sequence
MSILVTRPSP AGEELVSRLR TLGQVAWHFP LIEFSPGRQL PQLADQLAAL GESDLLFALS 
QHAVAFAQSQ LHQQDRKWPR LPNYFAIGRT TALALHTVSG QKILYPQDRE ISEVLLQLPE
LQNIAGKRAL ILRGNGGREL IGDTLTARGA EVTFCECYQR CAIHYDGAEE AMRWQSREVT
TVVVTSGEML QQLWSLIPQW YREHWLLHCR LLVVSERLAK LARELGWQDI KVADNADNDA
LLRALQ