Gene EcHS_A4008 details

Gene Information

• Locus tag: EcHS_A4008
• Symbol: wecE
• ID: 5592220
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli HS
• Kingdom: Bacteria
• Replicon accession: NC_009800
• Strand: +
• Start bp: 4003559
• End bp: 4004689
• Gene Length: 1131 bp
• Protein Length: 376 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 640923112
• Product: TDP-4-oxo-6-deoxy-D-glucose transaminase
• Protein accession: YP_001460583
• Protein GI: 157163265
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis
• TIGRFAM ID: [TIGR02379] TDP-4-keto-6-deoxy-D-glucose transaminase

Plasmid Coverage information

• Num covering plasmid clones: 45
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTCCAT TTAACGCACC GCCGGTGGTG GGAACCGAAC TCGACTATAT GCAGTCGGCA 
ATGGGTAGCG GCAAACTGTG TGGCGATGGC GGTTTTACCC GTCGCTGCCA GCAGTGGCTG 
GAGCAACGTT TTGGCAGCGC CAAAGTGTTA CTGACGCCGT CCTGCACCGC TTCGCTGGAG 
ATGGCGGCGC TGCTGCTCGA TATCCAGCCT GGCGATGAAG TGATCATGCC GAGCTACACC 
TTTGTCTCCA CCGCCAATGC CTTTGTGCTG CGTGGCGCAA AAATCGTTTT TGTGGATGTT 
CGCCCGGACA CCATGAACAT CGACGAAACG CTGATTGAAG CGGCGATCAC CGACAAAACG 
CGCGTTATCG TGCCGGTCCA TTACGCGGGT GTGGCCTGCG AAATGGACAC CATTATGGCG 
TTGGCGAAAA AGCATAATCT TTTTGTGGTG GAAGATGCCG CTCAGGGCGT GATGTCCACT 
TACAAAGGGC GTGCACTGGG AACCATTGGT CATATTGGCT GCTTTAGCTT CCATGAAACC 
AAAAACTACA CGGCGGGTGG TGAAGGCGGC GCGACGCTGA TTAACGATAA AGCGTTAATC 
GAACGAGCCG AGATCATCCG TGAAAAGGGC ACTAACCGCA GCCAGTTCTT CCGTGGTCAG 
GTCGATAAAT ATACCTGGCG CGATATTGGC TCCAGCTATT TGATGTCCGA TCTGCAAGCT 
GCGTACCTGT GGGCGCAACT GGAAGCAGCG GATCGTATCA ACCAGCAACG TCTGGCGCTG 
TGGCAAAACT ACTACGATGC GTTAGCGCCT CTGGCGAAAG CCGGGCGTAT CGAGCTGCCG 
TCGATTCCCG ATGGCTGCGT GCAGAACGCG CATATGTTCT ACATTAAACT GCGGGATATT 
GATGACCGGA GCGCGTTGAT TAACTTTCTG AAAGAAGCGG AAATCATGGC GGTGTTTCAT 
TACATTCCGC TGCACGGTTG CCCTGCGGGG GAACACTTTG GTGAGTTCCA CGGTGAAGAT 
CGCTACACCA CCAAAGAGAG CGAGCGCCTG CTGCGCCTGC CGCTGTTCTA CAACCTGTCG 
CCCGTCAATC AGCGTACGGT AATTGCGACT TTGTTGAACT ACTTCTCCTG A 

 

Protein sequence

MIPFNAPPVV GTELDYMQSA MGSGKLCGDG GFTRRCQQWL EQRFGSAKVL LTPSCTASLE 
MAALLLDIQP GDEVIMPSYT FVSTANAFVL RGAKIVFVDV RPDTMNIDET LIEAAITDKT 
RVIVPVHYAG VACEMDTIMA LAKKHNLFVV EDAAQGVMST YKGRALGTIG HIGCFSFHET 
KNYTAGGEGG ATLINDKALI ERAEIIREKG TNRSQFFRGQ VDKYTWRDIG SSYLMSDLQA 
AYLWAQLEAA DRINQQRLAL WQNYYDALAP LAKAGRIELP SIPDGCVQNA HMFYIKLRDI 
DDRSALINFL KEAEIMAVFH YIPLHGCPAG EHFGEFHGED RYTTKESERL LRLPLFYNLS 
PVNQRTVIAT LLNYFS