Gene EcHS_A4005 details

Gene Information

• Locus tag: EcHS_A4005
• Symbol: rfbB2
• ID: 5592287
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli HS
• Kingdom: Bacteria
• Replicon accession: NC_009800
• Strand: +
• Start bp: 4000935
• End bp: 4002002
• Gene Length: 1068 bp
• Protein Length: 355 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 640923109
• Product: dTDP-glucose 4,6-dehydratase
• Protein accession: YP_001460580
• Protein GI: 157163262
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1088] dTDP-D-glucose 4,6-dehydratase
• TIGRFAM ID: [TIGR01181] dTDP-glucose 4,6-dehydratase

Plasmid Coverage information

• Num covering plasmid clones: 55
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGAAAAA TTCTGATAAC AGGTGGTGCC GGGTTTATTG GCTCGGCGCT GGTGCGTTAT 
ATCATCAACG AAACGAGCGA TGCGGTGGTA GTGGTCGATA AGCTGACCTA CGCCGGAAAC 
CTGATGTCGC TGGCACCGGT CGCGCAAAGC GAGCACTTTG CCTTTGAGAA AGTTGATATC 
TGCGATCGGG CAGAACTGGC ACGCGTATTC ACTGAGCATC AGCCAGACTG TGTCATGCAT 
CTGGCAGCCG AAAGCCATGT TGACCGTTCT ATTGACGGCC CGGCAGCGTT TATTGAAACC 
AACATTGTCG GGACTTATAC ATTGCTTGAA GCGGCGCGGG CTTACTGGAA TACGCTGACG 
GAAGATAAAA AATCAGCGTT CCGTTTTCAT CATATCTCCA CCGACGAAGT ATATGGTGAC 
CTGCACTCGA CGGATGATTT CTTCACCGAA ACCACGCCGT ATGCGCCGAG CAGCCCTTAT 
TCCGCGTCAA AAGCCAGCAG CGACCATCTG GTGCGCGCCT GGCTGCGGAC CTACGGTCTG 
CCGACGCTGA TCACCAACTG CTCGAATAAC TACGGTCCTT ACCACTTTCC GGAAAAACTG 
ATCCCGCTGA TGATCCTCAA CGCGCTGGCG GGTAAACCGC TGCCGGTATA TGGCAACGGG 
CAGCAAATCC GTGACTGGCT GTATGTGGAA GATCACGCCC GCGCGCTGTA TTGCGTGGCG 
ACCACCGGGA AAGTCGGTGA AACCTATAAT ATTGGTGGTC ACAACGAGCG TAAGAATCTC 
GATGTTGTGG AAACCATTTG CGAGCTGCTG GAAGAACTGG CTCCGAACAA GCCGCACGGC 
GTGGTGCACT ATCGTGACTT GATCACCTTT GTCGCTGACC GTCCGGGGCA TGATCTGCGT 
TATGCCATTG ATGCTTCGAA AATTGCCCGT GAACTTGGTT GGCTGCCACA GGAAACCTTT 
GAAAGTGGAA TGCGTAAAAC GGTGCAGTGG TATCTGGCTA ATGAAAGCTG GTGGAAGCAG 
GTGCAGGACG GCAGCTATCA GGGCGAGCGT TTAGGTCTGA AAGGCTAA 

 

Protein sequence

MRKILITGGA GFIGSALVRY IINETSDAVV VVDKLTYAGN LMSLAPVAQS EHFAFEKVDI 
CDRAELARVF TEHQPDCVMH LAAESHVDRS IDGPAAFIET NIVGTYTLLE AARAYWNTLT 
EDKKSAFRFH HISTDEVYGD LHSTDDFFTE TTPYAPSSPY SASKASSDHL VRAWLRTYGL 
PTLITNCSNN YGPYHFPEKL IPLMILNALA GKPLPVYGNG QQIRDWLYVE DHARALYCVA 
TTGKVGETYN IGGHNERKNL DVVETICELL EELAPNKPHG VVHYRDLITF VADRPGHDLR 
YAIDASKIAR ELGWLPQETF ESGMRKTVQW YLANESWWKQ VQDGSYQGER LGLKG