Gene EcHS_A4002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A4002 
Symbol 
ID5590941 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp3997444 
End bp3998490 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content53% 
IMG OID640923106 
Productlipopolysaccharide biosynthesis protein WzzE 
Protein accessionYP_001460577 
Protein GI157163259 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3765] Chain length determinant protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones52 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACAAC CAATGCCTGG GAAACCGGCC GAAGACGCTG AAAATGAACT GGATATTCGT 
GGGTTGTTTC GTACCTTGTG GGCTGGGAAG CTATGGATTA TTGGCATGGG GCTGGCGTTT
GCGTTAATCG CGCTGGCGTA TACGTTTTTT GCTCGTCAGG AGTGGAGCTC GACGGCGATT
ACCGATCGTC CAACGGTGAA TATGCTGGGG GGATATTACT CGCAGCAGCA ATTTTTGCGT
AACCTGGATG TCCGTTCAAA CATGGCTTCT GCCGACCAAC CATCGGTCAT GGACGAAGCC
TATAAAGAGT TTGTTATGCA ACTGGCCTCG TGGGATACCC GCAGAGAGTT CTGGCTGCAA
ACCGACTATT ACAAACAGCG GATGGTGGGC AACAGCAAAG CCGATGCGGC GTTGCTGGAT
GAAATGATTA ACAACATCCA GTTTATCCCC GGAGACTTTA CCCGCGCGGT CAATGACAGC
GTGAAGCTTA TTGCCGAAAC CGCGCCTGAC GCTAATAACC TGTTACGTCA GTATGTTGCT
TTTGCCAGCC AGCGTGCAGC CAGCCATCTG AATGATGAGC TGAAAGGCGC ATGGGCGGCG
CGTACCATCC AGATGAAAGC TCAGGTGAAG CGTCAGGAAG AGGTGGCGAA AGCCATCTAC
GACCGCCGGA TGAACAGCAT TGAGCAGGCG CTGAAAATTG CTGAGCAGCA TAATATTTCG
CGCAGTGCGA CAGATGTACC TGCCGAGGAA TTACCTGATT CAGAAATGTT CCTGCTTGGG
CGTCCAATGC TTCAGGCTCG ACTGGAAAAT TTACAGGCCG TCGGTCCGGC CTTTGATCTC
GACTATGATC AGAATCGGGC CATGTTAAAC ACCCTGAATG TTGGTCCAAC CCTGGATCCG
CGTTTTCAGA CCTATCGCTA TTTGCGTACG CCGGAAGAAC CGGTAAAACG CGATAGCCCA
CGTCGTGCCT TCCTGATGAT TATGTGGGGC ATTGTCGGGG GGCTGATCGG GGCTGGTGTC
GCATTAACCC GCCGTTGCTC GAAATAG
 
Protein sequence
MTQPMPGKPA EDAENELDIR GLFRTLWAGK LWIIGMGLAF ALIALAYTFF ARQEWSSTAI 
TDRPTVNMLG GYYSQQQFLR NLDVRSNMAS ADQPSVMDEA YKEFVMQLAS WDTRREFWLQ
TDYYKQRMVG NSKADAALLD EMINNIQFIP GDFTRAVNDS VKLIAETAPD ANNLLRQYVA
FASQRAASHL NDELKGAWAA RTIQMKAQVK RQEEVAKAIY DRRMNSIEQA LKIAEQHNIS
RSATDVPAEE LPDSEMFLLG RPMLQARLEN LQAVGPAFDL DYDQNRAMLN TLNVGPTLDP
RFQTYRYLRT PEEPVKRDSP RRAFLMIMWG IVGGLIGAGV ALTRRCSK