Gene EcHS_A3994 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A3994 
Symbolrep 
ID5590899 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp3989090 
End bp3991111 
Gene Length2022 bp 
Protein Length673 aa 
Translation table11 
GC content54% 
IMG OID640923098 
ProductATP-dependent DNA helicase Rep 
Protein accessionYP_001460569 
Protein GI157163251 
COG category[L] Replication, recombination and repair 
COG ID[COG0210] Superfamily I DNA and RNA helicases 
TIGRFAM ID[TIGR01074] ATP-dependent DNA helicase Rep 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTCTAA ACCCCGGCCA ACAACAAGCT GTCGAATTCG TTACCGGCCC CTGCCTGGTG 
CTGGCGGGCG CGGGTTCCGG TAAAACTCGT GTTATCACCA ATAAAATCGC CCATCTGATC
CGCGGTTGCG GTTATCAGGC GCGGCACATT GCGGCGGTGA CCTTTACTAA TAAAGCAGCG
CGCGAGATGA AAGAGCGTGT AGGGCAGACG CTGGGGCGCA AAGAGGCGCG TGGGCTGATG
ATCTCCACTT TCCATACGTT GGGGCTGGAT ATCATCAAAC GCGAGTATGC GGCGCTTGGG
ATGAAAGCGA ACTTCTCGTT GTTTGACGAT ACCGATCAGC TTGCTTTGCT TAAAGAGTTG
ACCGAGGGGC TGATTGAAGA TGACAAAGTT CTCCTGCAAC AACTGATTTC GACCATCTCT
AACTGGAAGA ATGATCTCAA AACACCGTCC CAGGCGGCAG CAAGTGCGAT TGGCGAGCGG
GACCGTATTT TTGCCCATTG TTATGGGCTG TATGATGCAC ACCTGAAAGC CTGTAACGTT
CTCGACTTCG ATGATCTGAT TTTATTGCCG ACGTTGCTGC TGCAACGCAA TGAAGAAGTC
CGCGAGCGCT GGCAGAACAA AATTCGCTAT CTGCTGGTGG ATGAGTATCA GGACACCAAC
ACCAGCCAGT ATGAGCTGGT GAAACTGCTG GTGGGCAGCC GCGCGCGCTT TACCGTGGTG
GGTGACGATG ACCAGTCGAT CTACTCCTGG CGCGGTGCAC GTCCGCAAAA CCTGGTGCTG
CTGAGTCAGG ATTTTCCGGC GCTGAAGGTG ATTAAGCTTG AGCAGAACTA TCGCTCTTCC
GGGCGTATTC TGAAAGCGGC GAACATCCTG ATCGCCAATA ACCCGCACGT CTTTGAAAAG
CGTCTGTTCT CCGAACTGGG TTATGGCGCG GAGCTAAAAG TATTAAGCGC GAATAACGAA
GAACATGAGG CTGAGCGCGT TACTGGCGAG CTGATCGCCC ATCACTTCGT CAATAAAACG
CAGTACAAAG ATTACGCCAT TCTTTATCGC GGTAACCATC AGTCGCGGGT GTTTGAAAAA
TTCCTGATGC AAAACCGCAT CCCGTACAAA ATATCTGGTG GTACGTCGTT TTTCTCTCGT
CCTGAAATCA AGGACTTGCT GGCTTATCTG CGCGTGCTGA CTAACCCGGA CGATGACAGC
GCATTTCTGC GTATCGTTAA CACGCCGAAG CGAGAGATTG GCCCGGCTAC GCTGAAAAAG
CTGGGTGAGT GGGCGATGAC GCGCAATAAA AGCATGTTTA CCGCCAGCTT TGATATGGGC
CTGAGTCAGA CGCTTAGCGG ACGTGGTTAT GAAGCATTGA CCCGCTTCAC TCACTGGTTG
GCAGAAATCC AGCGTCTGGC GGAGCGGGAG CCGATTGCCG CGGTGCGTGA TCTGATCCAT
GGCATGGATT ATGAATCCTG GCTGTACGAA ACATCGCCCA GCCCGAAAGC CGCCGAAATG
CGCATGAAGA ACGTCAACCA ACTGTTTAGC TGGATGACGG AGATGCTGGA AGGCAGTGAA
CTGGATGAGC CGATGACGCT CACCCAGGTG GTGACGCGCT TTACTTTGCG CGACATGATG
GAGCGTGGTG AGAGTGAAGA AGAGCTGGAT CAGGTGCAAC TGATGACTCT CCACGCGTCG
AAAGGGCTGG AGTTTCCTTA TGTCTACATG GTCGGTATGG AAGAAGGGTT TTTGCCGCAC
CAGAGCAGCA TCGATGAAGA TAATATCGAT GAGGAGCGGC GGCTGGCCTA TGTCGGCATT
ACCCGCGCCC AGAAGGAATT GACCTTTACG CTGTGTAAAG AACGCCGTCA GTACGGCGAA
CTGGTGCGCC CGGAGCCGAG CCGCTTTTTG CTGGAGCTGC CGCAGGATGA TCTGATTTGG
GAACAGGAGC GCAAAGTGGT CAGCGCCGAA GAACGGATGC AGAAAGGGCA AAGCCATCTG
GCGAATCTGA AAGCGATGAT GGCGGCAAAA CGAGGGAAAT AA
 
Protein sequence
MRLNPGQQQA VEFVTGPCLV LAGAGSGKTR VITNKIAHLI RGCGYQARHI AAVTFTNKAA 
REMKERVGQT LGRKEARGLM ISTFHTLGLD IIKREYAALG MKANFSLFDD TDQLALLKEL
TEGLIEDDKV LLQQLISTIS NWKNDLKTPS QAAASAIGER DRIFAHCYGL YDAHLKACNV
LDFDDLILLP TLLLQRNEEV RERWQNKIRY LLVDEYQDTN TSQYELVKLL VGSRARFTVV
GDDDQSIYSW RGARPQNLVL LSQDFPALKV IKLEQNYRSS GRILKAANIL IANNPHVFEK
RLFSELGYGA ELKVLSANNE EHEAERVTGE LIAHHFVNKT QYKDYAILYR GNHQSRVFEK
FLMQNRIPYK ISGGTSFFSR PEIKDLLAYL RVLTNPDDDS AFLRIVNTPK REIGPATLKK
LGEWAMTRNK SMFTASFDMG LSQTLSGRGY EALTRFTHWL AEIQRLAERE PIAAVRDLIH
GMDYESWLYE TSPSPKAAEM RMKNVNQLFS WMTEMLEGSE LDEPMTLTQV VTRFTLRDMM
ERGESEEELD QVQLMTLHAS KGLEFPYVYM VGMEEGFLPH QSSIDEDNID EERRLAYVGI
TRAQKELTFT LCKERRQYGE LVRPEPSRFL LELPQDDLIW EQERKVVSAE ERMQKGQSHL
ANLKAMMAAK RGK