Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcHS_A3992 |
Symbol | ppiC |
ID | 5590897 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli HS |
Kingdom | Bacteria |
Replicon accession | NC_009800 |
Strand | - |
Start bp | 3987945 |
End bp | 3988226 |
Gene Length | 282 bp |
Protein Length | 93 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640923097 |
Product | peptidyl-prolyl cis-trans isomerase C |
Protein accession | YP_001460568 |
Protein GI | 157163250 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0760] Parvulin-like peptidyl-prolyl isomerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 58 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAAAA CAGCAGCAGC ACTGCATATC CTTGTAAAAG AAGAGAAACT GGCTCTGGAT CTTCTCGAGC AGATTAAGAA CGGGGCCGAT TTCGGCAAGC TGGCGAAGAA ACACTCCATT TGCCCATCAG GCAAACGCGG CGGTGATTTA GGTGAATTCC GCCAGGGTCA GATGGTTCCG GCGTTCGATA AAGTGGTTTT CTCTTGTCCG GTACTGGAGC CGACCGGCCC GCTGCACACC CAGTTCGGAT ATCACATCAT TAAGGTGCTG TACCGCAACT AA
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Protein sequence | MAKTAAALHI LVKEEKLALD LLEQIKNGAD FGKLAKKHSI CPSGKRGGDL GEFRQGQMVP AFDKVVFSCP VLEPTGPLHT QFGYHIIKVL YRN
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