Gene EcHS_A3988 details

Gene Information

• Locus tag: EcHS_A3988
• Symbol: ilvD
• ID: 5591059
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli HS
• Kingdom: Bacteria
• Replicon accession: NC_009800
• Strand: +
• Start bp: 3981891
• End bp: 3983741
• Gene Length: 1851 bp
• Protein Length: 616 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 640923093
• Product: dihydroxy-acid dehydratase
• Protein accession: YP_001460564
• Protein GI: 157163246
• COG category: [E] Amino acid transport and metabolism; [G] Carbohydrate transport and metabolism
• COG ID: [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase
• TIGRFAM ID: [TIGR00110] dihydroxy-acid dehydratase

Plasmid Coverage information

• Num covering plasmid clones: 52
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCTAAGT ATCGTTCCGC TACCACCACC CATGGCCGTA ATATGGCGGG GGCCCGCGCA 
CTGTGGCGCG CCACCGGGAT GACCGACGCC GATTTCGGTA AGCCGATTAT CGCGGTTGTG 
AACTCGTTCA CCCAATTTGT ACCGGGTCAC GTCCATCTGC GCGATCTCGG TAAACTGGTC 
GCCGAACAAA TTGAAGCGGC TGGCGGCGTT GCCAAAGAGT TCAACACCAT TGCGGTGGAT 
GATGGGATTG CCATGGGCCA CGGGGGGATG CTTTATTCAC TGCCATCTCG CGAACTGATC 
GCTGATTCCG TTGAGTATAT GGTCAACGCC CACTGCGCCG ATGCCATGGT CTGTATCTCC 
AACTGCGACA AAATCACCCC TGGGATGTTG ATGGCTTCCC TGCGATTAAA TATTCCGGTG 
ATCTTTGTTT CCGGCGGCCC GATGGAAGCC GGGAAAACCA AGCTGTCCGA TCGGATAATC 
AAGCTCGATC TGGTTGATGC GATGATCCAG GGCGCAGACC CGAAAGTCTC TGACTCCCAG 
AGCGATCAGG TTGAACGTTC CGCCTGCCCA ACCTGCGGTT CCTGCTCCGG GATGTTTACC 
GCTAACTCAA TGAACTGCCT GACCGAAGCG CTGGGTTTGT CGCAGCCAGG CAACGGCTCG 
CTGCTGGCAA CCCACGCGGA CCGTAAGCAG CTGTTCCTTA ATGCTGGTAA ACGCATTGTT 
GAATTGACCA AACGTTATTA CGAGCAAAAC GACGAAAGTG CACTGCCGCG TAATATCGCC 
AGTAAGGCGG CGTTTGAAAA CGCCATGACG CTGGATATCG CGATGGGTGG ATCGACTAAC 
ACCGTACTTC ACCTGCTGGC GGCGGCGCAG GAAGCGGAAA TCGACTTCAC CATGAGTGAT 
ATCGATAAGC TCTCCCGCAA GGTTCCGCAG CTGTGTAAAG TTGCGCCGAG CACCCAGAAA 
TACCATATGG AAGATGTTCA TCGTGCTGGT GGTGTTATCG GTATTCTCGG CGAACTGGAT 
CGTGCGGGGT TACTGAACCG TGATGTGAAA AACGTACTTG GCCTGACGTT GCCGCAAACG 
CTGGAACAAT ACGACGTTAT GCTGACCCAG GATGACGCGG TAAAAAATAT GTTCCGCGCA 
GGCCCGGCGG GCATTCGGAC TACACAGGCA TTCTCGCAGG ATTGCCGTTG GGATTCTCTC 
GATGACGATC GCGCAAACGG CTGTATCCGC TCGCTGGAAC ACGCCTACAG CAAAGACGGC 
GGCCTGGCGG TGCTCTACGG TAATTTCGCA GAAAACGGCT GCATCGTTAA AACCGCGGGC 
GTCGATGACA GCATCCTCAA ATTCACCGGC CCGGCGAAAG TGTACGAAAG CCAGGACGAC 
GCGGTAGAAG CGATTCTCGG CGGTAAAGTT GTCGCCGGAG ATGTGGTAGT AATTCGCTAT 
GAAGGCCCGA AAGGCGGTCC GGGGATGCAG GAAATGCTCT ACCCAACCAG CTTCCTGAAA 
TCAATGGGGC TCGGTAAAGC CTGTGCGCTG ATCACCGACG GTCGTTTCTC TGGCGGCACC 
TCTGGCCTTT CTATCGGGCA CGTCTCACCG GAAGCGGCAA GCGGCGGCAG CATTGGCCTG 
ATTGAAGACG GCGATCTTAT CGCTATCGAC ATTCCGAACC GTGGTATTCA GTTACAGGTA 
AGCGATGCCG AACTGGCGGC GCGTCGTGAA GCGCAGGAAG CCCGGGGTGA CAAAGCCTGG 
ACGCCGAAAA ACCGTGAACG TCAGGTTTCC TTTGCGCTGC GTGCCTACGC CAGCCTGGCG 
ACCAGCGCCG ACAAAGGTGC GGTGCGCGAT AAATCGAAAC TGGGGGGTTA A 

 

Protein sequence

MPKYRSATTT HGRNMAGARA LWRATGMTDA DFGKPIIAVV NSFTQFVPGH VHLRDLGKLV 
AEQIEAAGGV AKEFNTIAVD DGIAMGHGGM LYSLPSRELI ADSVEYMVNA HCADAMVCIS 
NCDKITPGML MASLRLNIPV IFVSGGPMEA GKTKLSDRII KLDLVDAMIQ GADPKVSDSQ 
SDQVERSACP TCGSCSGMFT ANSMNCLTEA LGLSQPGNGS LLATHADRKQ LFLNAGKRIV 
ELTKRYYEQN DESALPRNIA SKAAFENAMT LDIAMGGSTN TVLHLLAAAQ EAEIDFTMSD 
IDKLSRKVPQ LCKVAPSTQK YHMEDVHRAG GVIGILGELD RAGLLNRDVK NVLGLTLPQT 
LEQYDVMLTQ DDAVKNMFRA GPAGIRTTQA FSQDCRWDSL DDDRANGCIR SLEHAYSKDG 
GLAVLYGNFA ENGCIVKTAG VDDSILKFTG PAKVYESQDD AVEAILGGKV VAGDVVVIRY 
EGPKGGPGMQ EMLYPTSFLK SMGLGKACAL ITDGRFSGGT SGLSIGHVSP EAASGGSIGL 
IEDGDLIAID IPNRGIQLQV SDAELAARRE AQEARGDKAW TPKNRERQVS FALRAYASLA 
TSADKGAVRD KSKLGG