Gene EcHS_A3983 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A3983 
Symbol 
ID5591166 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp3976860 
End bp3978380 
Gene Length1521 bp 
Protein Length506 aa 
Translation table11 
GC content51% 
IMG OID640923088 
Productputative ATP-dependent protease 
Protein accessionYP_001460559 
Protein GI157163241 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0606] Predicted ATPase with chaperone activity 
TIGRFAM ID[TIGR00368] Mg chelatase-related protein 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCACTGT CAATTGTTCA TACCCGCGCA GCCCTGGGAG TAAATGCGCC CCCAATCACT 
GTTGAGGTAC ATATCAGTAA AGGTCTACCC GGCTTAACGA TGGTGGGCTT ACCAGAAACA
ACGGTGAAAG AAGCTCGCGA TCGCGTGCGC AGCGCCATTA TCAATAGCGG ATATGAATAT
CCGGCGAAAA AAATCACCAT CAACCTTGCT CCAGCCGATC TACCAAAAGA AGGGGGACGA
TATGATTTAC CTATCGCCAT TGCGTTGCTG GCGGCCTCAG AACAGCTTAC AGCCAATAAG
TTAGATGAAT ATGAATTAGT CGGAGAACTG GCGCTTACAG GCGCTCTGCG TGGCGTTCCC
GGCGCAATCT CCAGTGCAAC TGAAGCTATT AAGTCGGGCA GAAAAATTAT CGTCGCGAAA
GATAACGAAG ATGAAGTGGG GCTAATTAAC GGTGAAGGAT GCCTGATAGC CGATCATCTG
CAAGCTGTCT GTGCGTTTCT GGAAGGTAAG CACGCTCTCG AACGCCCGAA ACCAACTGAT
GCAGTATCCC GGGCGCTACA ACATGATCTC AGTGATGTTG TCGGTCAGGA ACATGGAAAG
CGAGGACTGG AAATTACCGC CGCTGGCGGG CACAACCTTT TACTGATTGG GCCTCCGGGA
ACAGGTAAAA CAATGCTCGC CAGCCGTATT AATGGCCTGT TGCCAGATTT AAGCAATGAA
GAGGCACTGG AGAGTGCTGC GATATTAAGT CTGGTAAATG CTGAATCAGT ACAAAAACAA
TGGCGGCAGC GCCCGTTCCG CTCACCTCAT CACAGTGCAT CGTTAACTGC GATGGTAGGC
GGTGGCGCAA TTCCAGGGCC CGGTGAAATT TCGCTGGCGC ATAACGGCGT GCTTTTTCTT
GATGAGTTAC CTGAATTTGA AAGGCGTACA CTGGATGCCT TGCGAGAGCC GATTGAATCC
GGGCAGATCC ATCTTTCACG CACGCGAGCA AAAATAACCT ATCCAGCCCG TTTCCAGCTT
GTCGCGGCGA TGAATCCCAG CCCTACCGGA CATTATCAGG GAAACCATAA CCGCTGCACA
CCAGAGCAAA CGCTGCGTTA TCTCAACCGA CTCTCTGGTC CCTTTCTCGA CCGCTTCGAT
CTCTCACTGG AGATCCCATT ACCGCCTCCC GGTATTTTGA GTAAAACGGT AGTGCCGGGA
GAAAGCAGCG CCACCGTTAA ACAACGCGTA ATGGCCGCCA GAGAGCGCCA ATTTAAGCGG
CAGAATAAAC TGAACGCCTG GCTGGATAGT CCGGAAATAC GCCAATTCTG CAAACTTGAG
AGCGAAGATG CGATGTGGCT GGAAGAAACG CTGATCCATC TGGGGTTATC GATTCGTGCC
TGGCAGCGGT TATTGAAAGT TGCACGAACC ATTGCTGATA TTGATCAGTC TGACATTATC
ACACGTCAAC ATTTGCAGGA GGCAGTTAGC TATCGAGCGA TTGACCGTTT GCTCATCCAT
CTGCAGAAAC TACTGACATA A
 
Protein sequence
MSLSIVHTRA ALGVNAPPIT VEVHISKGLP GLTMVGLPET TVKEARDRVR SAIINSGYEY 
PAKKITINLA PADLPKEGGR YDLPIAIALL AASEQLTANK LDEYELVGEL ALTGALRGVP
GAISSATEAI KSGRKIIVAK DNEDEVGLIN GEGCLIADHL QAVCAFLEGK HALERPKPTD
AVSRALQHDL SDVVGQEHGK RGLEITAAGG HNLLLIGPPG TGKTMLASRI NGLLPDLSNE
EALESAAILS LVNAESVQKQ WRQRPFRSPH HSASLTAMVG GGAIPGPGEI SLAHNGVLFL
DELPEFERRT LDALREPIES GQIHLSRTRA KITYPARFQL VAAMNPSPTG HYQGNHNRCT
PEQTLRYLNR LSGPFLDRFD LSLEIPLPPP GILSKTVVPG ESSATVKQRV MAARERQFKR
QNKLNAWLDS PEIRQFCKLE SEDAMWLEET LIHLGLSIRA WQRLLKVART IADIDQSDII
TRQHLQEAVS YRAIDRLLIH LQKLLT