Gene EcHS_A3974 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A3974 
Symbol 
ID5590961 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand- 
Start bp3969046 
End bp3969738 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content49% 
IMG OID640923079 
ProductGntR family transcriptional regulator 
Protein accessionYP_001460556 
Protein GI157163238 
COG category[K] Transcription 
COG ID[COG2186] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.000000000445513 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTTTAA GCGCACAACA GTTAGCTGCA CAGAAAAACC TTTCGTATGT TCTGGCTGAG 
AAGCTGGCGC AACGCATCTT AAAAGGTGAA TATGAACCCG GCACCATTTT GCCTGGTGAG 
ATTGAGCTGG GCGAGCAATT TGGAGTGAGT CGTACAGCGG TACGCGAAGC GGTCAAAACG 
TTAACGGCAA AAGGGATGGT TTTACCGCGA CCGCGAATTG GTACCCGGGT CATGCCACAA 
TCAAACTGGA ATTTTCTTGA TCAGGAATTG CTTACCTGGT GGATGACAGA AGAGAACTTT 
CATCAGGTCA TCGATCACTT TCTGGTTATG CGTATCTGTC TGGAGCCGCA AGCTTGCCTA 
CTGGCTGCAA CGGTTGGCAC CGCGGAACAG AAGGCGCATC TCAATACGTT AATGGCCGAA 
ATGGCGGCAT TAAAAGAGAA CTTTCGCCGT GAACGCTGGA TCGAAGTAGA TATGGCCTGG 
CATGAGCATA TCTATGAAAT GAGCGCCAAT CCGTTTTTGA CCTCATTCGC CTCGCTATTC 
CATTCGGTTT ATCACACTTA CTTCACGTCA ATTACCAGCG ACACAGTGAT AAAGCTGGAT 
CTGCACCAGG CGATTGTCGA TGCGATTGTC CAAAGCGATG GCGACGCGGC ATTTAAAGCT 
TGTCAGGCGC TGCTACGCTC ACCTGATACG TGA
 
Protein sequence
MPLSAQQLAA QKNLSYVLAE KLAQRILKGE YEPGTILPGE IELGEQFGVS RTAVREAVKT 
LTAKGMVLPR PRIGTRVMPQ SNWNFLDQEL LTWWMTEENF HQVIDHFLVM RICLEPQACL 
LAATVGTAEQ KAHLNTLMAE MAALKENFRR ERWIEVDMAW HEHIYEMSAN PFLTSFASLF 
HSVYHTYFTS ITSDTVIKLD LHQAIVDAIV QSDGDAAFKA CQALLRSPDT