Gene EcHS_A3971 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A3971 
Symbol 
ID5590958 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp3966987 
End bp3967265 
Gene Length279 bp 
Protein Length92 aa 
Translation table11 
GC content49% 
IMG OID640923077 
ProductISEhe3, transposase orfA 
Protein accessionYP_001460554 
Protein GI157163236 
COG category[L] Replication, recombination and repair 
COG ID[COG2963] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.000376066 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGGTA AGCGTTATCC CGAAGAGTTT AAAACTGAAG CAGTCAAACA GGTTGTTGAT 
CGCGGTTATT CTGTTGCCAG CGTTGCAACA CGTCTCGATA TCACCACCCA CAGCCTTTAT
GCCTGGATAA AGAAGTACGG TCCGGATTCT TCCACTAATA AAGAACAGTC AGATGCTCAG
GCCGAGATCC GCCGTCTCCA GAAAGAGCTG AAACGGGTTA CCGACGAACG GGACATATTA
AAAAAAGCCG CGGCGTACTT CGCAAAGCTG TCCGACTGA
 
Protein sequence
MSGKRYPEEF KTEAVKQVVD RGYSVASVAT RLDITTHSLY AWIKKYGPDS STNKEQSDAQ 
AEIRRLQKEL KRVTDERDIL KKAAAYFAKL SD