Gene EcHS_A3968 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A3968 
SymbolrbsK 
ID5591159 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp3964473 
End bp3965402 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content52% 
IMG OID640923075 
Productribokinase 
Protein accessionYP_001460552 
Protein GI157163234 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0524] Sugar kinases, ribokinase family 
TIGRFAM ID[TIGR02152] ribokinase 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value0.112559 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAAACG CAGGCAGCCT CGTTGTTCTT GGCAGCATTA ATGCTGACCA CATTCTTAAT 
CTTCAATCTT TTCCTACTCC AGGCGAAACC GTAACCGGTA ACCACTATCA GGTTGCATTT
GGCGGCAAAG GCGCGAATCA GGCTGTGGCT GCTGGGCGTA GCGGTGCGAA TATCGCGTTT
ATTGCCTGTA CGGGTGATGA CAGCATTGGT GAGAGCGTTC GCCAGCAGCT CGCCACTGAT
AACATTGATA TTACTCCGGT CAGCGTGATC AAAGGCGAAT CAACAGGTGT GGCGCTGATT
TTTGTTAATG GCGAAGGTGA GAATGTCATC GGTATTCATG CCGGCGCTAA TGCTGCCCTT
TCCCCGGCGC TGGTGGAAGC GCAACGTGAG CGTATTGCCA ACGCGTCAGC ATTATTAATG
CAGCTGGAAT CACCACTCGA AAGTGTGATG GCAGCGGCGA AAATCGCCCA TCAAAATAAG
ACTATCGTTG CGCTTAACCC GGCTCCGGCT CGCGAACTTC CTGACGAACT GCTGGCGCTG
GTGGACATTA TTACGCCAAA CGAAACGGAA GCAGAAAAGC TCACCGGTAT TCGTGTTGAA
AATGATGAAG ATGCAGCGAA GGCGGCGCAG GTACTGCATG AAAAAGGTAT CCGTACTGTA
CTGATTACTT TAGGAAGTCG TGGTGTATGG GCTAGCGTGA ATGGTGAAGG TCAGCGCGTT
CCTGGATTCC GGGTGCAGGC TGTCGATACC ATTGCTGCCG GAGATACCTT TAACGGTGCG
TTAATCACGG CATTGCTGGA AGAAAAACCA TTGCCAGAGG CGATTCGTTT TGCCCATGCT
GCCGCTGCGA TTGCCGTAAC ACGTAAAGGC GCACAACCTT CCGTACCGTG GCGTGAAGAG
ATCGACGCAT TTTTAGACAG GCAGAGGTGA
 
Protein sequence
MQNAGSLVVL GSINADHILN LQSFPTPGET VTGNHYQVAF GGKGANQAVA AGRSGANIAF 
IACTGDDSIG ESVRQQLATD NIDITPVSVI KGESTGVALI FVNGEGENVI GIHAGANAAL
SPALVEAQRE RIANASALLM QLESPLESVM AAAKIAHQNK TIVALNPAPA RELPDELLAL
VDIITPNETE AEKLTGIRVE NDEDAAKAAQ VLHEKGIRTV LITLGSRGVW ASVNGEGQRV
PGFRVQAVDT IAAGDTFNGA LITALLEEKP LPEAIRFAHA AAAIAVTRKG AQPSVPWREE
IDAFLDRQR