Gene EcHS_A3957 details

Gene Information

• Locus tag: EcHS_A3957
• Symbol: gidA
• ID: 5591178
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli HS
• Kingdom: Bacteria
• Replicon accession: NC_009800
• Strand: -
• Start bp: 3950923
• End bp: 3952812
• Gene Length: 1890 bp
• Protein Length: 629 aa
• Translation table: 11
• GC content: 54%
• IMG OID: 640923064
• Product: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
• Protein accession: YP_001460541
• Protein GI: 157163223
• COG category: [D] Cell cycle control, cell division, chromosome partitioning
• COG ID: [COG0445] NAD/FAD-utilizing enzyme apparently involved in cell division
• TIGRFAM ID: [TIGR00136] glucose-inhibited division protein A

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.00000431055
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTTTATC CGGATCCTTT TGACGTCATC ATCATTGGCG GGGGTCATGC AGGCACCGAG 
GCCGCGATGG CCGCGGCGCG TATGGGTCAA CAGACTCTGC TTTTGACACA CAATATCGAC 
ACTCTGGGGC AGATGAGCTG CAACCCGGCG ATCGGCGGTA TTGGGAAGGG ACATCTGGTA 
AAAGAAGTGG ATGCACTCGG CGGTCTGATG GCGAAAGCGA TCGATCAAGC GGGTATCCAG 
TTTAGGATAC TAAACGCAAG CAAAGGACCG GCGGTTCGCG CTACCCGAGC TCAGGCGGAT 
CGTGTGCTCT ACCGTCAGGC GGTACGTACG GCGCTGGAGA ACCAACCGAA CCTGATGATC 
TTCCAGCAGG CGGTTGAAGA TCTTATTGTC GAAAACGATC GCGTGGTCGG TGCTGTTACC 
CAAATGGGAC TGAAGTTCCG TGCCAAAGCC GTCGTGCTCA CCGTTGGGAC ATTCCTCGAC 
GGTAAAATTC ATATCGGTCT GGATAATTAC AGCGGTGGCC GTGCTGGTGA TCCGCCGTCC 
ATTCCGCTTT CTCGCCGTTT GCGTGAACTG CCGCTGCGCG TTGGTCGTCT GAAAACCGGG 
ACACCACCGC GTATTGATGC TCGAACTATC GACTTTAGTG TGCTGGCGCA ACAGCATGGC 
GATAACCCAA TGCCGGTATT CTCGTTTATG GGCAATGCGT CCCAGCATCC CCAGCAGGTG 
CCGTGTTATA TCACTCATAC CAACGAGAAA ACCCATGATG TGATCCGCAG TAACCTCGAT 
CGTAGCCCAA TGTATGCAGG GGTGATCGAA GGTGTCGGCC CACGCTACTG CCCGTCGATC 
GAAGACAAAG TCATGCGCTT CGCCGACAGA AATCAGCATC AGATCTTCCT TGAACCGGAA 
GGACTGACCT CTAACGAAAT TTATCCGAAC GGTATCTCCA CCAGCCTGCC GTTCGATGTG 
CAGATGCAAA TCGTCCGCTC TATGCAGGGG ATGGAAAACG CGAAGATCGT GCGTCCGGGT 
TATGCCATTG AGTATGACTT CTTCGATCCT CGCGACCTGA AACCGACGCT GGAGAGCAAG 
TTTATCCAGG GGCTGTTCTT TGCTGGTCAG ATTAACGGCA CTACCGGTTA CGAAGAAGCC 
GCTGCGCAAG GTTTACTGGC CGGTCTTAAC GCTGCCCGTC TGTCTGCTGA CAAAGAAGGT 
TGGGCTCCGG CGCGTTCTCA GGCGTATCTC GGCGTACTGG TTGATGACCT GTGCACTTTA 
GGAACCAAAG AACCGTATCG TATGTTTACC TCGCGCGCAG AATATCGTCT GATGCTGCGC 
GAAGATAACG CGGATCTGCG TTTGACTGAA ATCGGTCGTG AACTGGGCCT GGTGGATGAC 
GAACGTTGGG CGCGCTTTAA CGAGAAACTT GAGAATATCG AGCGTGAGCG TCAGCGTCTG 
AAATCGACCT GGGTAACCCC GTCGGCGGAA GCTGCAGCCG AAGTGAATGC TCACCTGACT 
GCGCCGCTTT CCCGTGAAGC CAGTGGTGAA GATCTGCTGC GTCGTCCGGA AATGACTTAT 
GAAAAATTAA CCACGCTGAC GCCGTTTGCC CCTGCGTTGA CAGACGAACA GGCGGCGGAA 
CAGGTTGAGA TTCAGGTTAA ATACGAAGGT TATATCGCGC GCCAGCAAGA TGAGATCGAA 
AAGCAGCTGC GTAACGAGAA CACCCTGCTA CCCGCGACAC TGGATTACCG CCAGGTATCC 
GGTCTTTCTA ACGAAGTGAT CGCCAAACTT AACGATCACA AACCGGCCTC TATCGGCCAG 
GCTTCACGTA TTTCTGGCGT CACGCCTGCG GCCATCTCCA TTCTGCTGGT GTGGCTGAAA 
AAACAGGGTA TGCTGCGTCG TAGCGCATAA 

 

Protein sequence

MFYPDPFDVI IIGGGHAGTE AAMAAARMGQ QTLLLTHNID TLGQMSCNPA IGGIGKGHLV 
KEVDALGGLM AKAIDQAGIQ FRILNASKGP AVRATRAQAD RVLYRQAVRT ALENQPNLMI 
FQQAVEDLIV ENDRVVGAVT QMGLKFRAKA VVLTVGTFLD GKIHIGLDNY SGGRAGDPPS 
IPLSRRLREL PLRVGRLKTG TPPRIDARTI DFSVLAQQHG DNPMPVFSFM GNASQHPQQV 
PCYITHTNEK THDVIRSNLD RSPMYAGVIE GVGPRYCPSI EDKVMRFADR NQHQIFLEPE 
GLTSNEIYPN GISTSLPFDV QMQIVRSMQG MENAKIVRPG YAIEYDFFDP RDLKPTLESK 
FIQGLFFAGQ INGTTGYEEA AAQGLLAGLN AARLSADKEG WAPARSQAYL GVLVDDLCTL 
GTKEPYRMFT SRAEYRLMLR EDNADLRLTE IGRELGLVDD ERWARFNEKL ENIERERQRL 
KSTWVTPSAE AAAEVNAHLT APLSREASGE DLLRRPEMTY EKLTTLTPFA PALTDEQAAE 
QVEIQVKYEG YIARQQDEIE KQLRNENTLL PATLDYRQVS GLSNEVIAKL NDHKPASIGQ 
ASRISGVTPA AISILLVWLK KQGMLRRSA