| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A3954 |
|---|
| Symbol | atpB |
|---|
| ID | 5591142 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli HS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009800 |
|---|
| Strand | - |
|---|
| Start bp | 3948415 |
|---|
| End bp | 3949230 |
|---|
| Gene Length | 816 bp |
|---|
| Protein Length | 271 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640923061 |
|---|
| Product | F0F1 ATP synthase subunit A |
|---|
| Protein accession | YP_001460538 |
|---|
| Protein GI | 157163220 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0356] F0F1-type ATP synthase, subunit a |
|---|
| TIGRFAM ID | [TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00000000000890174 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTTCAG AAAATATGAC GCCGCAGGAT TACATAGGAC ACCACCTGAA TAACCTTCAG
CTGGACCTGC GTACATTCTC GCTGGTGGAT CCACAAAACC CCCCAGCCAC CTTCTGGACA
ATCAATATTG ACTCCATGTT CTTCTCGGTG GTGCTGGGTC TGTTGTTCTT GGTTTTATTC
CGTAGCGTAG CCAAAAAGGC GACCAGCGGT GTGCCAGGTA AGTTTCAGAC CGCGATTGAG
CTGGTGATCG GCTTTGTTAA TGGTAGCGTG AAAGACATGT ACCATGGCAA AAGCAAGCTG
ATTGCTCCGC TGGCCCTGAC GATCTTCGTC TGGGTATTCC TGATGAACCT GATGGATTTA
CTGCCTATCG ACCTGCTGCC GTACATTGCT GAACATGTAC TGGGTCTGCC TGCACTGCGT
GTGGTTCCGT CTGCGGACGT GAACGTAACG CTGTCTATGG CACTGGGCGT ATTTATCCTG
ATTCTGTTCT ACAGCATCAA AATGAAAGGC ATCGGCGGCT TCACGAAAGA GTTGACGCTG
CAGCCGTTCA ATCACTGGGC GTTCATTCCT GTCAACTTAA TCCTTGAAGG GGTAAGCCTG
CTGTCCAAAC CAGTTTCACT CGGTTTGCGA CTGTTCGGTA ACATGTATGC CGGTGAGCTG
ATTTTCATTC TGATTGCTGG TCTGTTGCCG TGGTGGTCAC AGTGGATCCT GAATGTGCCG
TGGGCCATTT TCCACATCCT GATCATTACG CTGCAAGCCT TCATCTTCAT GGTTCTGACG
ATCGTCTATC TGTCGATGGC GTCTGAAGAA CATTAA
|
|---|
| Protein sequence | MASENMTPQD YIGHHLNNLQ LDLRTFSLVD PQNPPATFWT INIDSMFFSV VLGLLFLVLF
RSVAKKATSG VPGKFQTAIE LVIGFVNGSV KDMYHGKSKL IAPLALTIFV WVFLMNLMDL
LPIDLLPYIA EHVLGLPALR VVPSADVNVT LSMALGVFIL ILFYSIKMKG IGGFTKELTL
QPFNHWAFIP VNLILEGVSL LSKPVSLGLR LFGNMYAGEL IFILIAGLLP WWSQWILNVP
WAIFHILIIT LQAFIFMVLT IVYLSMASEE H
|
|---|
| |