Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcHS_A3944 |
Symbol | glmS |
ID | 5591203 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli HS |
Kingdom | Bacteria |
Replicon accession | NC_009800 |
Strand | - |
Start bp | 3939018 |
End bp | 3940847 |
Gene Length | 1830 bp |
Protein Length | 609 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640923051 |
Product | glucosamine--fructose-6-phosphate aminotransferase |
Protein accession | YP_001460528 |
Protein GI | 157163210 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0449] Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains |
TIGRFAM ID | [TIGR01135] glucosamine--fructose-6-phosphate aminotransferase (isomerizing) |
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Plasmid Coverage information |
Num covering plasmid clones | 57 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTGTGGAA TTGTTGGCGC GATCGCGCAA CGTGATGTAG CAGAAATCCT TCTTGAAGGT TTACGTCGTC TGGAATACCG CGGATATGAC TCTGCCGGTC TGGCCGTTGT TGATGCAGAA GGTCATATGA CCCGCCTGCG TCGCCTCGGT AAAGTCCAGA TGCTGGCACA GGCAGCGGAA GAACATCCTC TGCATGGCGG CACTGGTATT GCTCACACTC GCTGGGCGAC CCACGGTGAA CCTTCAGAAG TGAATGCGCA TCCGCATGTT TCTGAACACA TTGTGGTGGT GCATAACGGC ATCATCGAAA ACCATGAACC GCTGCGTGAA GAGCTAAAAG CGCGTGGCTA TACCTTCGTT TCTGAAACCG ACACCGAAGT GATTGCCCAT CTGGTGAACT GGGAGCTGAA ACAAGGCGGG ACTCTGCGTG AGGCCGTTCT GCGTGCTATC CCGCAGCTGC GTGGTGCGTA CGGTACAGTG ATCATGGACT CCCGTCACCC GGATACCCTG CTGGCGGCAC GTTCTGGTAG TCCGCTGGTG ATTGGCCTGG GGATGGGCGA AAACTTTATC GCTTCTGACC AGCTGGCGCT GTTGCCGGTG ACCCGTCGCT TTATCTTCCT TGAAGAGGGC GATATTGCGG AAATCACTCG CCGTTCGGTA AACATCTTCG ATAAAACTGG CGCGGAAGTA AAACGTCAGG ATATCGAATC CAATCTGCAA TATGACGCGG GCGATAAAGG CATTTACCGT CACTACATGC AGAAAGAGAT CTACGAACAG CCGAACGCGA TCAAAAACAC CCTTACCGGA CGCATCAGCC ACGGTCAGGT TGATTTAAGC GAGCTGGGAC CGAACGCCGA CGAACTGCTG TCGAAGGTTG AGCATATTCA GATCCTCGCC TGTGGTACTT CTTATAACTC CGGTATGGTT TCCCGCTACT GGTTTGAATC GCTAGCAGGT ATTCCGTGCG ACGTCGAAAT CGCCTCTGAA TTCCGCTATC GCAAATCTGC CGTGCGTCGT AACAGCCTGA TGATCACCTT GTCACAGTCT GGCGAAACCG CGGATACACT GGCTGGCCTG CGTCTGTCGA AAGAGCTGGG TTACCTTGGT TCACTGGCAA TCTGTAACGT TCCGGGTTCT TCTCTGGTGC GCGAATCCGA TCTGGCGCTA ATGACCAACG CGGGTACAGA AATCGGCGTG GCATCCACTA AAGCATTCAC CACTCAGTTA ACTGTGCTGT TGATGCTGGT GGCGAAGCTG TCTCGCCTGA AAGGTCTGGA TGCCTCCATT GAACATGACA TTGTGCATGG TCTGCAGGCG TTGCCGAGCC GTATTGAGCA GATGCTGTCT CAGGACAAAC GCATTGAAGC TCTGGCAGAA GATTTCTCTG ACAAACATCA CGCGCTGTTC CTGGGCCGTG GCGATCAGTA CCCAATCGCG CTGGAAGGCG CATTGAAGCT GAAAGAGATC TCTTACATTC ACGCTGAAGC CTACGCTGCA GGTGAACTGA AACACGGTCC GCTGGCGCTG ATTGATGCCG ATATGCCGGT TATCGTCGTT GCACCGAACA ACGAATTGCT GGAAAAACTA AAATCCAACA TTGAAGAAGT TCGCGCGCGT GGCGGTCAGT TGTATGTCTT CGCCGATCAG GATGCGGGTT TTGTAAGTAG CGATAACATG CACATCATCG AGATGCCGCA TGTGGAAGAG GTGATTGCAC CAATCTTCTA CACCGTTCCG CTGCAGCTAC TGGCTTATCA CGTCGCGCTG ATCAAAGGTA CCGACGTTGA CCAGCCGCGT AACCTGGCAA AATCGGTTAC GGTTGAGTAA
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Protein sequence | MCGIVGAIAQ RDVAEILLEG LRRLEYRGYD SAGLAVVDAE GHMTRLRRLG KVQMLAQAAE EHPLHGGTGI AHTRWATHGE PSEVNAHPHV SEHIVVVHNG IIENHEPLRE ELKARGYTFV SETDTEVIAH LVNWELKQGG TLREAVLRAI PQLRGAYGTV IMDSRHPDTL LAARSGSPLV IGLGMGENFI ASDQLALLPV TRRFIFLEEG DIAEITRRSV NIFDKTGAEV KRQDIESNLQ YDAGDKGIYR HYMQKEIYEQ PNAIKNTLTG RISHGQVDLS ELGPNADELL SKVEHIQILA CGTSYNSGMV SRYWFESLAG IPCDVEIASE FRYRKSAVRR NSLMITLSQS GETADTLAGL RLSKELGYLG SLAICNVPGS SLVRESDLAL MTNAGTEIGV ASTKAFTTQL TVLLMLVAKL SRLKGLDASI EHDIVHGLQA LPSRIEQMLS QDKRIEALAE DFSDKHHALF LGRGDQYPIA LEGALKLKEI SYIHAEAYAA GELKHGPLAL IDADMPVIVV APNNELLEKL KSNIEEVRAR GGQLYVFADQ DAGFVSSDNM HIIEMPHVEE VIAPIFYTVP LQLLAYHVAL IKGTDVDQPR NLAKSVTVE
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