| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A3905 |
|---|
| Symbol | |
|---|
| ID | 5591958 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli HS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009800 |
|---|
| Strand | - |
|---|
| Start bp | 3900166 |
|---|
| End bp | 3900783 |
|---|
| Gene Length | 618 bp |
|---|
| Protein Length | 205 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640923013 |
|---|
| Product | 2-dehydro-3-deoxy-6-phosphogalactonate aldolase |
|---|
| Protein accession | YP_001460490 |
|---|
| Protein GI | 157163172 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0800] 2-keto-3-deoxy-6-phosphogluconate aldolase |
|---|
| TIGRFAM ID | [TIGR01182] Entner-Doudoroff aldolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 83 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGTGGC AAACTAAACT CCCGCTGATC GCCATTTTGC GCGGTATTAC GCCCGACGAG
GCGCTGGCGC ATGTTGGCGC GGTGATTGAC GCCGGGTTCG ACGCGGTTGA AATCCCGCTG
AATTCCCCAC AATGGGAGCA AAGCATTCCC GCCATCGTTG ATGCGTACGG CGACAAGGCG
TTGATTGGCG CAGGTACGGT ACTGAAACCT GAACAGGTCG ATGCGCTCGC CAGGATGGGC
TGTCAGCTCA TCGTTACGCC CAATATCCAT AGTGAAGTGA TCCGCCGTGC GGTGGGCTAC
GGCATGACCG TCTGCCCCGG CTGCGCGACG GCGACCGAAG CCTTTACCGC GCTCGAAGCG
GGCGCGCAGG CGCTGAAAAT ATTTCCGTCA TCGGCTTTTG GTCCGCAATA CATCAAAGCG
TTAAAAGCGG TATTGCCATC GGACATCGCA GTCTTTGCCG TTGGCGGCGT GACGCCAGAA
AACCTGGCGC AGTGGATAGA CGCAGGTTGT GCAGGGGCGG GCTTAGGCAG CGATCTCTAT
CGCGCCGGGC AATCCGTAGA GCGCACCGCG CAGCAGGCAG CAGCATTTGT TAAGGCGTAT
CGAGAGGCAG TGCAATGA
|
|---|
| Protein sequence | MQWQTKLPLI AILRGITPDE ALAHVGAVID AGFDAVEIPL NSPQWEQSIP AIVDAYGDKA
LIGAGTVLKP EQVDALARMG CQLIVTPNIH SEVIRRAVGY GMTVCPGCAT ATEAFTALEA
GAQALKIFPS SAFGPQYIKA LKAVLPSDIA VFAVGGVTPE NLAQWIDAGC AGAGLGSDLY
RAGQSVERTA QQAAAFVKAY REAVQ
|
|---|
| |