Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcHS_A3904 |
Symbol | |
ID | 5591957 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli HS |
Kingdom | Bacteria |
Replicon accession | NC_009800 |
Strand | - |
Start bp | 3899021 |
End bp | 3900169 |
Gene Length | 1149 bp |
Protein Length | 382 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640923012 |
Product | galactonate dehydratase |
Protein accession | YP_001460489 |
Protein GI | 157163171 |
COG category | [M] Cell wall/membrane/envelope biogenesis [R] General function prediction only |
COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 79 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATCA CCAAAATTAC CACGTATCGT TTACCTCCCC GCTGGATGTT CCTGAAAATT GAAACCGATG AAGGCGTGGT CGGTTGGGGC GAGCCCGTGA TCGAAGGCCG CGCCCGTACG GTGGAAGCGG CAGTTCACGA GCTGGGTGAC TATTTGATTG GTCAGGATCC ATCGCGCATC AATGACTTAT GGCAAGTGAT GTATCGCGCC GGATTCTATC GCGGCGGTCC GATCCTGATG AGCGCCATCG CCGGGATTGA CCAGGCGTTA TGGGATATCA AAGGTAAAGT GCTGAATGCG CCGGTCTGGC AACTGATGGG CGGCCTGGTT CGCGACAAAA TTAAAGCCTA CAGTTGGGTC GGCGGCGATC GTCCGGCGGA TGTTATCGGC GGCATTAAAA CCCTGCGCGA AATCGGCTTC GATACCTTCA AACTGAACGG TTGTGAAGAA CTGGGGCTAA TTGATAACTC CCGCGCGGTA GATGCGGCAG TCAACACCGT GGCACAAATT CGTGAAGCTT TTGGCAATCA GATTGAGTTT GGTCTTGATT TCCACGGTCG CGTCAGCGCG CCGATGGCGA AAGTGCTGAT TAAAGAACTG GAGCCGTATC GCCCGCTGTT TATTGAAGAG CCGGTGCTGG CAGAACAAGC CGAATACTAC CCGAAACTGG CGGCACAAAC GCATATTCCA CTGGCGGCGG GTGAGCGCAT GTTCTCACGC TTCGATTTTA AACGCGTGCT GGAGGCAGGC GGTATTTCGA TTCTGCAACC GGATCTCTCC CATGCAGGCG GTATTACTGA ATGCTACAAA ATTGCCGGAA TGGCAGAAGC CTATGATGTG ACCCTTGCGC CGCACTGTCC GCTCGGACCG ATTGCACTGG CGGCTTGCCT GCATATCGAC TTTGTTTCCT ATAACGCCGT ACTTCAGGAA CAAAGTATGG GCATTCATTA CAACAAAGGC GCGGAGTTAC TCGACTTTGT GAAAAACAAA GAGGACTTCA GCATGGTTGG CGGCTTCTTT AAACCGCTAA CGAAACCGGG CTTAGGCGTG GAAATCGACG AAGCTAAAGT TATTGAGTTC AGTAAAAATG CCCCGGACTG GCGTAATCCG CTCTGGCGTC ATGAAGATAA CAGCGTAGCA GAGTGGTAA
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Protein sequence | MKITKITTYR LPPRWMFLKI ETDEGVVGWG EPVIEGRART VEAAVHELGD YLIGQDPSRI NDLWQVMYRA GFYRGGPILM SAIAGIDQAL WDIKGKVLNA PVWQLMGGLV RDKIKAYSWV GGDRPADVIG GIKTLREIGF DTFKLNGCEE LGLIDNSRAV DAAVNTVAQI REAFGNQIEF GLDFHGRVSA PMAKVLIKEL EPYRPLFIEE PVLAEQAEYY PKLAAQTHIP LAAGERMFSR FDFKRVLEAG GISILQPDLS HAGGITECYK IAGMAEAYDV TLAPHCPLGP IALAACLHID FVSYNAVLQE QSMGIHYNKG AELLDFVKNK EDFSMVGGFF KPLTKPGLGV EIDEAKVIEF SKNAPDWRNP LWRHEDNSVA EW
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