Gene EcHS_A3904 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A3904 
Symbol 
ID5591957 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp3899021 
End bp3900169 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content53% 
IMG OID640923012 
Productgalactonate dehydratase 
Protein accessionYP_001460489 
Protein GI157163171 
COG category[M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only 
COG ID[COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones79 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATCA CCAAAATTAC CACGTATCGT TTACCTCCCC GCTGGATGTT CCTGAAAATT 
GAAACCGATG AAGGCGTGGT CGGTTGGGGC GAGCCCGTGA TCGAAGGCCG CGCCCGTACG
GTGGAAGCGG CAGTTCACGA GCTGGGTGAC TATTTGATTG GTCAGGATCC ATCGCGCATC
AATGACTTAT GGCAAGTGAT GTATCGCGCC GGATTCTATC GCGGCGGTCC GATCCTGATG
AGCGCCATCG CCGGGATTGA CCAGGCGTTA TGGGATATCA AAGGTAAAGT GCTGAATGCG
CCGGTCTGGC AACTGATGGG CGGCCTGGTT CGCGACAAAA TTAAAGCCTA CAGTTGGGTC
GGCGGCGATC GTCCGGCGGA TGTTATCGGC GGCATTAAAA CCCTGCGCGA AATCGGCTTC
GATACCTTCA AACTGAACGG TTGTGAAGAA CTGGGGCTAA TTGATAACTC CCGCGCGGTA
GATGCGGCAG TCAACACCGT GGCACAAATT CGTGAAGCTT TTGGCAATCA GATTGAGTTT
GGTCTTGATT TCCACGGTCG CGTCAGCGCG CCGATGGCGA AAGTGCTGAT TAAAGAACTG
GAGCCGTATC GCCCGCTGTT TATTGAAGAG CCGGTGCTGG CAGAACAAGC CGAATACTAC
CCGAAACTGG CGGCACAAAC GCATATTCCA CTGGCGGCGG GTGAGCGCAT GTTCTCACGC
TTCGATTTTA AACGCGTGCT GGAGGCAGGC GGTATTTCGA TTCTGCAACC GGATCTCTCC
CATGCAGGCG GTATTACTGA ATGCTACAAA ATTGCCGGAA TGGCAGAAGC CTATGATGTG
ACCCTTGCGC CGCACTGTCC GCTCGGACCG ATTGCACTGG CGGCTTGCCT GCATATCGAC
TTTGTTTCCT ATAACGCCGT ACTTCAGGAA CAAAGTATGG GCATTCATTA CAACAAAGGC
GCGGAGTTAC TCGACTTTGT GAAAAACAAA GAGGACTTCA GCATGGTTGG CGGCTTCTTT
AAACCGCTAA CGAAACCGGG CTTAGGCGTG GAAATCGACG AAGCTAAAGT TATTGAGTTC
AGTAAAAATG CCCCGGACTG GCGTAATCCG CTCTGGCGTC ATGAAGATAA CAGCGTAGCA
GAGTGGTAA
 
Protein sequence
MKITKITTYR LPPRWMFLKI ETDEGVVGWG EPVIEGRART VEAAVHELGD YLIGQDPSRI 
NDLWQVMYRA GFYRGGPILM SAIAGIDQAL WDIKGKVLNA PVWQLMGGLV RDKIKAYSWV
GGDRPADVIG GIKTLREIGF DTFKLNGCEE LGLIDNSRAV DAAVNTVAQI REAFGNQIEF
GLDFHGRVSA PMAKVLIKEL EPYRPLFIEE PVLAEQAEYY PKLAAQTHIP LAAGERMFSR
FDFKRVLEAG GISILQPDLS HAGGITECYK IAGMAEAYDV TLAPHCPLGP IALAACLHID
FVSYNAVLQE QSMGIHYNKG AELLDFVKNK EDFSMVGGFF KPLTKPGLGV EIDEAKVIEF
SKNAPDWRNP LWRHEDNSVA EW