Gene EcHS_A3818 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A3818 
Symbol 
ID5592945 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp3813992 
End bp3814465 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content55% 
IMG OID640922930 
Productputative tRNA/rRNA methyltransferase YibK 
Protein accessionYP_001460408 
Protein GI157163090 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0219] Predicted rRNA methylase (SpoU class) 
TIGRFAM ID[TIGR00185] rRNA methylase, putative, group 2 


Plasmid Coverage information

Num covering plasmid clones77 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTAAACA TCGTACTTTA CGAACCAGAA ATTCCGCCAA ATACTGGCAA CATCATCCGT 
CTTTGCGCTA ATACCGGCTT TCGTCTGCAT ATCATCGAAC CGATGGGATT TGCCTGGGAC
GATAAGCGCC TGCGCCGCGC GGGGCTGGAC TATCACGAGT TTACCGCCGT TACGCGTCAT
CATGACTTTC GCGCGTTCCT CGAAGCAGAA AATCCCCAGC GCCTGTTTGC CCTCACCACG
AAAGGTACGC CTGCTCACAG CGCCGTAAGC TATCAGGATG GCGATTATCT GATGTTCGGC
CCGGAAACAC GCGGCCTGCC AGCGAGCATT CTTGATGCCC TGCCCGCTGA ACAAAAAATT
CGCATTCCGA TGGTGCCGGA CAGCCGCAGC ATGAACCTGT CCAATGCGGT GTCAGTTGTG
GTGTATGAAG CCTGGCGGCA GCTGGGATAT CCGGGAGCGT TGTTGAGAGA TTAG
 
Protein sequence
MLNIVLYEPE IPPNTGNIIR LCANTGFRLH IIEPMGFAWD DKRLRRAGLD YHEFTAVTRH 
HDFRAFLEAE NPQRLFALTT KGTPAHSAVS YQDGDYLMFG PETRGLPASI LDALPAEQKI
RIPMVPDSRS MNLSNAVSVV VYEAWRQLGY PGALLRD