Gene EcHS_A3786 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A3786 
Symbol 
ID5593443 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp3778535 
End bp3779395 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content56% 
IMG OID640922900 
Productputative L-xylulose 5-phosphate 3-epimerase 
Protein accessionYP_001460378 
Protein GI157163060 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3623] Putative L-xylulose-5-phosphate 3-epimerase 
TIGRFAM ID[TIGR00542] hexulose-6-phosphate isomerase, putative 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGTAATC ATCCGTTAGG GATTTATGAA AAAGCGCTGG CGAAAGATCT CTCCTGGCCG 
GAGCGGCTGG TGCTGGCAAA AAGCTGCGGT TTTGATTTTG TCGAAATGTC GGTGGATGAA
ACCGACGAAC GGCTCTCACG TCTTGACTGG AGCGCCGCAC AAAGGACTTC GCTGGTTGCC
GCGATGATCG AAACAGGTGT TGGGATCCCG TCGATGTGCC TGTCCGCACA TCGTCGCTTT
CCCTTTGGTA GCCGTGACGA GGCAGTGCGC GAACGGGCGC GGGAAATCAT GAGTAAAGCG
ATTCGCCTGG CGCGCGATCT CGGCATTCGC ACCATCCAGC TGGCAGGTTA TGACGTCTAT
TACGAAGACC ACGACGAAGG CACCCGGCAA CGTTTTGCTG AAGGGCTGGC GTGGGCAGTC
GAACAGGCGG CGGCATCACA AGTAATGCTG GCGGTGGAGA TTATGGATAC CGCGTTTATG
AACTCCATCA GCAAATGGAA AAAATGGGAC GAGATGCTCG CCTCACCGTG GTTCACCGTC
TACCCGGACG TCGGCAACCT CAGCGCCTGG GGCAATGATG TTCCCGCCGA ACTGAAACTG
GGCATTGACC GTATCGCCGC GATCCACCTG AAAGACACCC AGCCAGTCAC CGGGCAAAGT
CCCGGACAGT TCCGCGACGT GCCGTTTGGC GAAGGCTGCG TCGATTTCGT TGGCATCTTC
AAAACGCTGC ATAAACTGAA CTATCGCGGT TCTTTCCTGA TTGAGATGTG GACCGAAAAA
GCCAAAGAGC CGGTGCTGGA GATTATTCAG GCGCGGCGTT GGATTGAAGC GCGTATGCAG
GAGGCTGGAT TTATATGTTA G
 
Protein sequence
MRNHPLGIYE KALAKDLSWP ERLVLAKSCG FDFVEMSVDE TDERLSRLDW SAAQRTSLVA 
AMIETGVGIP SMCLSAHRRF PFGSRDEAVR ERAREIMSKA IRLARDLGIR TIQLAGYDVY
YEDHDEGTRQ RFAEGLAWAV EQAAASQVML AVEIMDTAFM NSISKWKKWD EMLASPWFTV
YPDVGNLSAW GNDVPAELKL GIDRIAAIHL KDTQPVTGQS PGQFRDVPFG EGCVDFVGIF
KTLHKLNYRG SFLIEMWTEK AKEPVLEIIQ ARRWIEARMQ EAGFIC