| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A3783 |
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| Symbol | |
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| ID | 5595245 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli HS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009800 |
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| Strand | + |
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| Start bp | 3775397 |
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| End bp | 3776383 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640922897 |
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| Product | TRAP transporter solute receptor DctP family protein |
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| Protein accession | YP_001460375 |
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| Protein GI | 157163057 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 58 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTAC GCTCTGTAAC CTACGCATTA TTCATTGCTG GCCTGGCTGC ATTCAGCACA
TCTTCTCTGG CGGCACAATC TTTACGTTTC GGTTATGAAA CATCACAAAC CGACTCGCAA
CATATTGCGG CGAAAAAATT CAATGATTTA TTGCAGGAGA GAACCAAAGG CGAGCTGAAA
TTAAAACTGT TCCCGGACAG CACTCTCGGT AACGCGCAGG CGATGATCAG CGGCGTACGT
GGCGGCACCA TCGATATGGA AATGTCCGGC TCGAATAACT TTGCCGGGTT ATCACCAGTG
ATGAACTTGC TTGATGTCCC TTTCCTGTTC CGCGATACCG CTCACGCGCA TAAAACGCTC
GACGGCAAAG TCGGTGATGA TCTGAAAGCC TCACTTGAAG GTAAAGGACT GAAAGTACTG
GCCTACTGGG AAAACGGCTG GCGCGATGTC ACCAACTCGC GCGCACCGGT TAAAACCCCC
GCCGACCTGA AAGGGCTGAA AATCCGCACC AACAATAGCC CAATGAATAT CGCCGCATTC
AAAGTCTTTG GCGCTAACCC GATCCCGATG CCGTTTGCCG AAGTCTATAC CGGGCTGGAA
ACCCGCACTA TCGACGCTCA GGAACACCCG ATCAACGTCG TCTGGTCAGC AAAATTTTTC
GAAGTGCAGA AGTTCCTTTC TCTGACGCAC CACGCCTATT CCCCGCTTCT GGTGGTGATC
AACAAAGCGA AGTTTGATGG CTTAAGTCCG GAGTTCCAGC AGGCGCTAGT TTCATCTGCA
CAAGAAGCGG GTAACTATCA GCGCAAACTG GTTGCTGAAG ATCAGCAAAA AATCATCGAC
GGCATGAAAG AAGCGGGCGT GGAAGTCATC ACCGATCTCG ACCGCAAAGC CTTTAGCGAC
GCACTGGGGA ATCAGGTTCG CGACATGTTT GTTAAAGATG TGCCGCAGGG AGCTGATCTG
CTGAAAGCCG TGGATGAGGT GCAATAA
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| Protein sequence | MKLRSVTYAL FIAGLAAFST SSLAAQSLRF GYETSQTDSQ HIAAKKFNDL LQERTKGELK
LKLFPDSTLG NAQAMISGVR GGTIDMEMSG SNNFAGLSPV MNLLDVPFLF RDTAHAHKTL
DGKVGDDLKA SLEGKGLKVL AYWENGWRDV TNSRAPVKTP ADLKGLKIRT NNSPMNIAAF
KVFGANPIPM PFAEVYTGLE TRTIDAQEHP INVVWSAKFF EVQKFLSLTH HAYSPLLVVI
NKAKFDGLSP EFQQALVSSA QEAGNYQRKL VAEDQQKIID GMKEAGVEVI TDLDRKAFSD
ALGNQVRDMF VKDVPQGADL LKAVDEVQ
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