Gene EcHS_A3781 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A3781 
Symbol 
ID5595243 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp3773631 
End bp3774104 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content44% 
IMG OID640922895 
Product2,3-diketo-L-gulonate TRAP transporter small permease protein YiaM 
Protein accessionYP_001460373 
Protein GI157163055 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3090] TRAP-type C4-dicarboxylate transport system, small permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones58 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAA TACTCGAAGC AATACTGGCG ATTAATCTCG CCGTACTTTC CTGTATTGTG 
TTTATAAACA TTATTTTAAG ATATGGTTTT CAAACAAGTA TTTTATCTGT AGATGAATTG
TCGCGTTATT TATTTGTCTG GTTAACATTT ATTGGCGCGA TTGTGGCTTT TATGGATAAC
GCCCACGTTC AGGTCACCTT TCTGGTGGAG AAACTCTCCC CCGCATGGCA GCGACGAGTC
GCTCTGGTTA CCCATTCCTT AATCTTATTT ATTTGTGGCG CACTGGCCTG GGGCGCAACG
CTAAAAACAA TTCAGGACTG GAGCGATTAT TCACCGATCC TCGGTTTACC CATCGGCCTG
ATGTATGCCG CTTATCTGCC CACCAGCCTC GTTATCGCAT TCTTTGAACT GCGTCATTTA
TATCAACTCA TCACGCGTAG CAATTCTCTA ACGTCGCCAC CGCAAGGAGC TTAA
 
Protein sequence
MKKILEAILA INLAVLSCIV FINIILRYGF QTSILSVDEL SRYLFVWLTF IGAIVAFMDN 
AHVQVTFLVE KLSPAWQRRV ALVTHSLILF ICGALAWGAT LKTIQDWSDY SPILGLPIGL
MYAAYLPTSL VIAFFELRHL YQLITRSNSL TSPPQGA