Gene EcHS_A3778 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A3778 
Symbol 
ID5592986 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp3770987 
End bp3771799 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content53% 
IMG OID640922892 
ProductIclR family transcriptional regulator 
Protein accessionYP_001460370 
Protein GI157163052 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones68 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGCAGG AAAAAGAGCG TCCAGCCGGA AGCCAGAGTC TGTTTCGCGG GTTGATGCTG 
ATTGAGATTT TGAGCAACTA TCCAAACGGT TGTCCGTTGG CGCATCTTTC GGAGCTGGCT
GGTTTAAATA AGAGTACCGT CCATCGCTTA TTGCAGGGAT TACAGTCCTG CGGCTATGTG
ACCACCGCGC CTGCCGCAGG GAGTTATCGC CTGACCACCA AATTTATTGC CGTCGGGCAG
AAGGCGCTGT CTTCGCTGAA TATCATTCAT ATCGCCGCTC CGCATCTTGA GGCACTGAAC
ATCGCCACTG GTGAAACCAT TAACTTCTCC AGCCGCGAAG ACGATCACGC TATTTTGATT
TATAAGCTGG AACCCACAAC CGGGATGCTG CGAACCCGTG CCTATATTGG CCAGCATATG
CCGCTCTACT GTTCCGCAAT GGGCAAGATC TACATGGCGT TTGGTCACCC GGACTACGTG
AAGTCATACT GGGAAAGCCA TCAGCATGAG ATCCAGCCGT TAACCCGCAA TACCATTACC
GAGCTGCCCG CGATGTTCGA CGAACTGGCG CACATTCGTG AAAGCGGAGC GGCGATGGAC
AGAGAAGAAA ACGAACTCGG CGTCTCCTGT ATTGCTGTTC CGGTGTTTGA TATTCATGGG
CGGGTGCCGT ACGCCGTGTC GATTTCGCTT TCGACATCAC GTCTGAAACA GGTGGGAGAG
AAAAATCTCC TGAAACCACT GCGTGAAACC GCGCAGGCTA TTTCTAATGA ACTGGGATTT
ACTGTCAGGG ATGACCTGGG CGCGATCACA TAA
 
Protein sequence
MAQEKERPAG SQSLFRGLML IEILSNYPNG CPLAHLSELA GLNKSTVHRL LQGLQSCGYV 
TTAPAAGSYR LTTKFIAVGQ KALSSLNIIH IAAPHLEALN IATGETINFS SREDDHAILI
YKLEPTTGML RTRAYIGQHM PLYCSAMGKI YMAFGHPDYV KSYWESHQHE IQPLTRNTIT
ELPAMFDELA HIRESGAAMD REENELGVSC IAVPVFDIHG RVPYAVSISL STSRLKQVGE
KNLLKPLRET AQAISNELGF TVRDDLGAIT