Gene EcHS_A3774 details

Gene Information

• Locus tag: EcHS_A3774
• Symbol: malS
• ID: 5592852
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli HS
• Kingdom: Bacteria
• Replicon accession: NC_009800
• Strand: +
• Start bp: 3766800
• End bp: 3768830
• Gene Length: 2031 bp
• Protein Length: 676 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 640922888
• Product: periplasmic alpha-amylase precursor
• Protein accession: YP_001460366
• Protein GI: 157163048
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG0366] Glycosidases

Plasmid Coverage information

• Num covering plasmid clones: 65
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAACTCG CCGCCTGTTT TCTGACACTC CTTCCTGGCT TCGCCGTTGC CGCCAGCTGG 
ACTTCTCCGG GGTTTCCCGC CTTTAGCGAA CAGGGGACAG GAACATTTGT CAGCCACGCG 
CAGTTGCCCA AAGGTACGCG TCCACTAACG CTAAATTTTG ACCAACAGTG CTGGCAGCCT 
GCGGATGCGA TAAAACTCAA TCAGATGCTT TCCCTGCAAC CTTGTAGCAA CACGCCGCCT 
CAATGGCGAT TGTTCAGGGA CGGCGAATAT ACGCTGCAAA TAGACACCCG CTCCGGTACG 
CCAACATTGA TGATTTCCAT CCAGAACGCC GCCGAACCGG TAGCAAGCCT GGTCCGTGAA 
TGCCCGAAAT GGGATGGATT ACCGCTCACA GTGGATGTCA GCGCCACTTT CCCGGAAGGA 
GCCGCCGTAC GGGATTATTA CAGCCAGCAA ATTGCGATAG TGAAGAACGG TCAAATAATG 
TTACAACCCG CTGCCACCAG CAACGGTTTA CTCCTGCTGG AACGGGCAGA AACTGACACA 
TCCGCCCCTT TCGACTGGCA TAACGCCACG GTTTACTTTG TGCTGACAGA TCGTTTCGAA 
AACGGCGATC CCAGTAATGA CCAGAGTTAC GGACGTCATA AAGACGGTAT GGCGGAAATT 
GGCACTTTTC ACGGCGGCGA TTTACGCGGC CTGACCAACA AACTGGATTA CCTCCAGCAG 
TTGGGCGTTA ATGCTTTATG GATAAGCGCC CCATTTGAGC AAATTCACGG CTGGGTCGGC 
GGCGGTACAA AAGGCGATTT CCCGCATTAT GCCTACCACG GTTATTACAC ACAGGACTGG 
ACGAATCTTG ATGCCAATAT GGGCAACGAA GCCGATCTAC GGACGCTGGT TGATAGCGCA 
CATCAGCGCG GTATTCGTAT TCTCTTTGAT GTCGTGATGA ACCACACCGG CTATGCCACG 
CTGGCGGATA TGCAGGAGTA TCAGTTTGGC GCGTTATATC TTTCTGGTGA CGAAGTGAAA 
AAATCGCTGG GTGAACGCTG GAGCGACTGG AAACCTGCCG CCGGGCAAAC CTGGCATAGC 
TTTAACGATT ACATTAATTT CAGCGACAAA ACAGGCTGGG ATAAATGGTG GGGAAAAAAC 
TGGATCAGAA CGGATATCGG CGATTACGAC AATCCTGGAT TCGACGATCT CACTATGTCG 
CTAGCCTTTT TGCCGGATAT CAAAACCGAA TCAACTACCG CTTCTGGTCT GCCGGTGTTC 
TATAAAAACA AAATGGATAC CCACGCCAAA GCCATTGACG GCTATACGCC GCGCGATTAC 
TTAACCCACT GGTTAAGTCA GTGGGTCCGC GACTATGGGA TTGATGGTTT TCGGGTCGAT 
ACCGCCAAAC ATGTTGAGTT GCCCGCCTGG CAGCAACTGA AAACCGAAGC CAGCGCCGCG 
CTTCGCGAAT GGAAAAAAGC TAACCCCGAC AAAGCATTAG ATGACAAACC TTTCTGGATG 
ACCGGTGAAG CCTGGGGCCA CGGCGTGATG CAAAGTGACT ACTATCGCCA CGGCTTCGAT 
GCGATGATCA ATTTCGATTA TCAGGAGCAG GCGGCGAAAG CAGTCGACTG TCTGGCGCAG 
ATGGATACGA CCTGGCAGCA AATGGCGGAG AAATTGCAGG GTTTCAACGT GTTGAGCTAC 
CTCTCGTCGC ATGATACCCG CCTGTTCCGT GAAGGGGGCG ACAAAGCAGC AGAGTTATTA 
CTATTAGCGC CAGGCGCGGT ACAAATCTTT TATGGTGATG AATCCTCGCG TCCGTTCGGT 
CCTACAGGTT CTGATCCGCT GCAAGGTACA CGTTCGGATA TGAACTGGCA GGATGTTAGC 
GGTAAATCTG CCGCCAGCGT CGCGCACTGG CAGAAAATCA GCCAGTTCCG CGCCCGCCAT 
CCCGCAATTG GCGCGGGCAA ACAAACGACA CTTTTGCTGA AGCAGGGCTA CGGCTTTGTT 
CGTGAGCATG GCGACGATAA AGTGCTGGTC GTCTGGGCAG GGCAACAGTA A 

 

Protein sequence

MKLAACFLTL LPGFAVAASW TSPGFPAFSE QGTGTFVSHA QLPKGTRPLT LNFDQQCWQP 
ADAIKLNQML SLQPCSNTPP QWRLFRDGEY TLQIDTRSGT PTLMISIQNA AEPVASLVRE 
CPKWDGLPLT VDVSATFPEG AAVRDYYSQQ IAIVKNGQIM LQPAATSNGL LLLERAETDT 
SAPFDWHNAT VYFVLTDRFE NGDPSNDQSY GRHKDGMAEI GTFHGGDLRG LTNKLDYLQQ 
LGVNALWISA PFEQIHGWVG GGTKGDFPHY AYHGYYTQDW TNLDANMGNE ADLRTLVDSA 
HQRGIRILFD VVMNHTGYAT LADMQEYQFG ALYLSGDEVK KSLGERWSDW KPAAGQTWHS 
FNDYINFSDK TGWDKWWGKN WIRTDIGDYD NPGFDDLTMS LAFLPDIKTE STTASGLPVF 
YKNKMDTHAK AIDGYTPRDY LTHWLSQWVR DYGIDGFRVD TAKHVELPAW QQLKTEASAA 
LREWKKANPD KALDDKPFWM TGEAWGHGVM QSDYYRHGFD AMINFDYQEQ AAKAVDCLAQ 
MDTTWQQMAE KLQGFNVLSY LSSHDTRLFR EGGDKAAELL LLAPGAVQIF YGDESSRPFG 
PTGSDPLQGT RSDMNWQDVS GKSAASVAHW QKISQFRARH PAIGAGKQTT LLLKQGYGFV 
REHGDDKVLV VWAGQQ