Gene EcHS_A3732 details

Gene Information

• Locus tag: EcHS_A3732
• ID: 5593874
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli HS
• Kingdom: Bacteria
• Replicon accession: NC_009800
• Strand: -
• Start bp: 3724942
• End bp: 3726897
• Gene Length: 1956 bp
• Protein Length: 651 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 640922847
• Product: putative phosphodiesterase
• Protein accession: YP_001460326
• Protein GI: 157163008
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG2199] FOG: GGDEF domain; [COG2200] FOG: EAL domain
• TIGRFAM ID: [TIGR00254] diguanylate cyclase (GGDEF) domain

Plasmid Coverage information

• Num covering plasmid clones: 64
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAATGG TGGCAGCCGT TGTCCTGGTG TTCGTTTTTA TTTTTTGCAC CGTTTTGCTG 
TTCCATCTGG TCCAGCAGAA TCGCTATAAC ACGGCTACGC AACTGGAAAG CATTGCTCGC 
TCTGTCCGCG AACCCTTATC TTCAGCTATT TTGAAAGGCG ATATTCCCGA AGCGGAAGCT 
ATTCTTGCCA GCATTAAACC GGCAGGCGTG GTCAGCCGTG CCGATGTAGT GCTGCCTAAC 
CAGTTCCAGG CGCTGCGTAA AAGTTTTATT CCAGAGCGCC CGGTGCCGGT AATGGTTACT 
CGCCTGTTTG AGCTACCGGT TCAAATCTCG CTGGGCGTTT ACTCGCTCGA ACGTCCGGCA 
AACCCGCAGC CAATTGCCTA TCTGGTACTA CAGGCGGATT CCTTCCGTAT GTATAAGTTC 
GTGATGAGCA CCCTCTCAAC GTTAGTGACC ATTTACTTAC TTTTGTCGCT TATCCTGACC 
GTCGCCATCA GCTGGTGCAT TAACCGCCTG ATTTTGCATC CGTTACGCAA TATTGCTCGC 
GAACTTAACG CCATCCCAGC CAAGGAGCTT GTTGGTCACC AACTGGCATT ACCGCGTCTG 
CATCAGGACG ATGAAATCGG TATGTTGGTG CGCAGTTACA ACCTCAACCA GCAATTGCTG 
CAGCGCCATT ATGAAGAACA GAACGAAAAT GCGATGCGCT TCCCGGTGTC GGATTTGCCG 
AACAAAGCCT TGCTGATGGA GATGCTGGAG CAGGTTGTCG CGCGTAAACA AACCACCGCG 
CTGATGATCA TCACCTGTGA AACCCTGCGT GATACTGCGG GCGTGCTGAA AGAGGCGCAA 
CGAGAAATTC TGCTGCTGAC GCTGGTGGAA AAACTCAAAT CGGTACTGTC GCCACGTATG 
ATCCTCGCGC AGATTAGCGG TTATGACTTT GCTGTCATTG CCAACGGTGT ACAGGAACCG 
TGGCACGCAA TCACCTTAGG TCAGCAAGTG CTCACTATCA TGAGCGAGCG CCTGCCGATT 
GAACGTATTC AACTCCGTCC GCACTGTAGC ATTGGCGTGG CGATGTTCTA CGGCGATCTC 
ACCGCCGAAC AGCTTTACAG TCGCGCTATT TCTGCGGCAT TTACCGCTCG CCATAAAGGC 
AAGAATCAGA TTCAGTTCTT TGATCCGCAG CAGATGGAAG CCGCCCAGAA GCGGTTGACG 
GAAGAGAGCG ATATCCTTAA TGCACTGGAA AATCATCAGT TTGCTATTTG GTTACAGCCA 
CAGGTCGAGA TGACCAGCGG TAAACTGGTC AGTGCGGAAG TGTTACTGCG TATCCAGCAA 
CCGGATGGCA GTTGGGACCT GCCGGATGGC TTAATCGATC GCATTGAGTG CTGTGGGCTG 
ATGGTTACCG TCGGTCACTG GGTGCTGGAA GAGTCCTGTC GATTGCTTGC AGCCTGGCAA 
GAGCGCGGCA TTATGCTGCC CTTGTCGGTA AACCTCTCTG CGCTGCAACT GATGCACCCG 
AATATGGTGG CGGATATGCT GGAACTGTTA ACCCGCTATC GCATTCAGCC GGGAACACTG 
ATTCTGGAAG TGACAGAAAG CCGACGTATT GACGACCCTC ATGCTGCGGT GGCAATCCTC 
CGTCCGCTGC GCAATGCCGG AGTTCGGGTG GCGCTGGATG ATTTCGGCAT GGGCTACGCA 
GGGCTGCGTC AGCTGCAGCA TATGAAATCG TTGCCAATCG ACGTACTGAA AATCGACAAA 
ATGTTTGTTG AAGGCTTGCC GGGAGATAGC AGCATGATTG CTGCAATTAT CATGCTGGCG 
CAGAGCCTGA ACTTACAAAT GATTGCCGAA GGCGTGGAGA CTGAAGCACA ACGCGACTGG 
CTGGCAAAAG CGGGCGTTGG TATTGCCCAG GGCTTCCTTT TTGCTCGCCC ACTCCCTATT 
GAAATCTTCG AAGAGAGTTA CCTGGAAGAA AAGTAG 

 

Protein sequence

MAMVAAVVLV FVFIFCTVLL FHLVQQNRYN TATQLESIAR SVREPLSSAI LKGDIPEAEA 
ILASIKPAGV VSRADVVLPN QFQALRKSFI PERPVPVMVT RLFELPVQIS LGVYSLERPA 
NPQPIAYLVL QADSFRMYKF VMSTLSTLVT IYLLLSLILT VAISWCINRL ILHPLRNIAR 
ELNAIPAKEL VGHQLALPRL HQDDEIGMLV RSYNLNQQLL QRHYEEQNEN AMRFPVSDLP 
NKALLMEMLE QVVARKQTTA LMIITCETLR DTAGVLKEAQ REILLLTLVE KLKSVLSPRM 
ILAQISGYDF AVIANGVQEP WHAITLGQQV LTIMSERLPI ERIQLRPHCS IGVAMFYGDL 
TAEQLYSRAI SAAFTARHKG KNQIQFFDPQ QMEAAQKRLT EESDILNALE NHQFAIWLQP 
QVEMTSGKLV SAEVLLRIQQ PDGSWDLPDG LIDRIECCGL MVTVGHWVLE ESCRLLAAWQ 
ERGIMLPLSV NLSALQLMHP NMVADMLELL TRYRIQPGTL ILEVTESRRI DDPHAAVAIL 
RPLRNAGVRV ALDDFGMGYA GLRQLQHMKS LPIDVLKIDK MFVEGLPGDS SMIAAIIMLA 
QSLNLQMIAE GVETEAQRDW LAKAGVGIAQ GFLFARPLPI EIFEESYLEE K