| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A3717 |
|---|
| Symbol | gadW |
|---|
| ID | 5593979 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli HS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009800 |
|---|
| Strand | - |
|---|
| Start bp | 3705201 |
|---|
| End bp | 3705929 |
|---|
| Gene Length | 729 bp |
|---|
| Protein Length | 242 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640922831 |
|---|
| Product | transcriptional regulator GadW |
|---|
| Protein accession | YP_001460311 |
|---|
| Protein GI | 157162993 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 0.347301 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTCATG TCTGCTCGGT GATCCTCATT CGTCGTTCAT TCGATATTTA TCATGAACAG
CAAAAAATAT CGCTGCATAA CGAGAGTATT CTGCTGCTGG AGAAAAATTT GGCAGACGAT
TTTGCGTTTT GTTCACCGGA TACGCGACGA CTGGATATCG ATGAGCTGAC AGTTTGCCAT
TACTTACAAA ATATTCGTCA GCTACCACGC AATTTAGGGT TACACAGCAA AGACCGTTTG
TTAATTAACC AGTCACCCCC CATGCCGCTG GTGACGGCGA TTTTTGATAG CTTCAATGAA
TCCGGGGTAA ATTCACCGAT ACTGAGCAAT ATGCTCTACC TTTCCTGTTT ATCGATGTTT
TCTCATAAGA AAGAACTGAT CCCCTTACTT TTCAATAGCA TCAGCACTGT TTCAGGAAAA
GTTGAACGCC TTATTAGCTT TGATATCGCC AAACGTTGGT ATCTGCGCGA TATCGCGGAA
AGAATGTATA CCAGCGAGAG TCTAATCAAA AAAAAGTTGC AGGATGAAAA TACCTGTTTC
AGTAAAATAT TACTCGCCTC CAGGATGTCG ATGGCCAGAC GATTACTCGA GTTACGTCAA
ATTCCTCTGC ATACTATTGC GGAAAAATGT GGCTATAGCA GTACATCGTA CTTTATAAAC
ACATTTCGAC AATATTATGG TGTAACGCCA CATCAGTTTG CGCAACATTC GCCAGGTACC
TTTTCCTGA
|
|---|
| Protein sequence | MTHVCSVILI RRSFDIYHEQ QKISLHNESI LLLEKNLADD FAFCSPDTRR LDIDELTVCH
YLQNIRQLPR NLGLHSKDRL LINQSPPMPL VTAIFDSFNE SGVNSPILSN MLYLSCLSMF
SHKKELIPLL FNSISTVSGK VERLISFDIA KRWYLRDIAE RMYTSESLIK KKLQDENTCF
SKILLASRMS MARRLLELRQ IPLHTIAEKC GYSSTSYFIN TFRQYYGVTP HQFAQHSPGT
FS
|
|---|
| |