| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A3679 |
|---|
| Symbol | nikE |
|---|
| ID | 5591714 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli HS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009800 |
|---|
| Strand | + |
|---|
| Start bp | 3664046 |
|---|
| End bp | 3664852 |
|---|
| Gene Length | 807 bp |
|---|
| Protein Length | 268 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640922795 |
|---|
| Product | nickel transporter ATP-binding protein NikE |
|---|
| Protein accession | YP_001460275 |
|---|
| Protein GI | 157162957 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1124] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
|---|
| TIGRFAM ID | [TIGR02769] nickel import ATP-binding protein NikE |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 71 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCTTAC TTAACGTCTG CGGCCTTTCC CATCACTATG CCCACGGTGG ATTTAGCGGA
AAACATCAAC ATCAGGCGGT GCTGAATAAC GTTTCCCTGA CCCTGAAAAG CGGCGAAACC
GTCGCCCTGC TGGGACGCAG CGGCTGCGGA AAAAGCACCC TCGCGCGGCT GCTGGTAGGC
TTAGAGTCTC CCTCACAAGG GAATATTAGC TGGCGCGGCG AACCGCTGGC GAAACTCAAT
CGCGCCCAGC GTAAAGCGTT CCGCCGCGAT ATTCAGATGG TATTTCAGGA CTCCATCAGC
GCCGTGAATC CGCGCAAAAC CGTGCGCGAG ATCCTGCGTG AACCGATGCG CCACCTGCTA
TCACTGAAAA AATCCGAACA ACTGGCGCGC GCCAGCGAAA TGCTGAAGGC GGTCGATCTC
GATGACAGCG TTCTCGACAA ACGCCCACCG CAGTTAAGCG GCGGCCAGCT CCAGCGCGTC
TGCCTGGCTC GCGCACTGGC GGTCGAACCG AAACTACTGA TTCTGGATGA AGCCGTTTCT
AACCTTGATC TCGTGTTACA GGCGGGCGTC ATTCGCCTGC TGAAAAAGCT ACAACAACAG
TTTGGCACTG CCTGCCTGTT CATCACCCAC GACTTACGCC TGGTGGAACG CTTTTGCCAG
CGAGTGATGG TGATGGACAA CGGACAAATC GTCGAAACCC AGGCGGTGGG AGATAAATTA
ACCTTTTCCT CTGACGCCGG ACGTGTGCTA CAAAACGCGG TATTACCCGC ATTCCCCGTG
CGCCGTCGCA CCTCAGAAAA GGTTTAA
|
|---|
| Protein sequence | MTLLNVCGLS HHYAHGGFSG KHQHQAVLNN VSLTLKSGET VALLGRSGCG KSTLARLLVG
LESPSQGNIS WRGEPLAKLN RAQRKAFRRD IQMVFQDSIS AVNPRKTVRE ILREPMRHLL
SLKKSEQLAR ASEMLKAVDL DDSVLDKRPP QLSGGQLQRV CLARALAVEP KLLILDEAVS
NLDLVLQAGV IRLLKKLQQQ FGTACLFITH DLRLVERFCQ RVMVMDNGQI VETQAVGDKL
TFSSDAGRVL QNAVLPAFPV RRRTSEKV
|
|---|
| |